Regulon of Dnr in Shewanella loihica PV-4
| Regulator type: | Transcription factor |
| TF locus tag: | Shew_3331 |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Denitrification |
| Effector: | Nitric oxide |
| Regulog: | Dnr - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - CRP
- By effector - Nitric oxide
- By pathway - Denitrification
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -131
Score: 5.8 Sequence: ACTTGACCAAAGTCAATT
Locus tag: Shew_3335
Name: nirK Funciton: Copper-containing nitrite reductase (EC 1.7.2.1)
Locus tag: Shew_3334
Name: Sden_3481 Funciton: hypothetical protein
Locus tag: Shew_3333
Name: sco Funciton: Putative copper metallochaperone, Sco1/SenC/PrrC family
Locus tag: Shew_3332
Name: cox Funciton: Copper metallochaperone, bacterial analog of Cox17 protein
Locus tag: Shew_3331
Name: Dnr Funciton: Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) |
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nirK
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Copper-containing nitrite reductase (EC 1.7.2.1)
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Sden_3481
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hypothetical protein
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sco
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Putative copper metallochaperone, Sco1/SenC/PrrC family
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cox
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Copper metallochaperone, bacterial analog of Cox17 protein
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Dnr
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Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)
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Position: -100
Score: 5.1 Sequence: ATTTGATCTCAGTCACGT
Locus tag: Shew_3399
Name: nosR Funciton: Nitrous oxide reductase maturation protein NosR
Locus tag: Shew_3400
Name: nosZ Funciton: Nitrous-oxide reductase (EC 1.7.99.6)
Locus tag: Shew_3401
Name: nosD Funciton: Nitrous oxide reductase maturation protein NosD
Locus tag: Shew_3402
Name: nosF Funciton: Nitrous oxide reductase maturation protein NosF (ATPase)
Locus tag: Shew_3403
Name: nosY Funciton: Nitrous oxide reductase maturation transmembrane protein NosY
Locus tag: Shew_3404
Name: nosL Funciton: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL |
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nosR
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Nitrous oxide reductase maturation protein NosR
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nosZ
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Nitrous-oxide reductase (EC 1.7.99.6)
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nosD
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Nitrous oxide reductase maturation protein NosD
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nosF
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Nitrous oxide reductase maturation protein NosF (ATPase)
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nosY
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Nitrous oxide reductase maturation transmembrane protein NosY
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nosL
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Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |