Regulon of BioR in Paracoccus denitrificans PD1222

Properties
Regulator type:	Transcription factor
TF locus tag:	Pden_2922, Pden_1431
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Biotin biosynthesis
Effector:
Regulog:	BioR - Rhodobacterales
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 18 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - GntR/Others
By pathway - Biotin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -39 Score: 4.3 Sequence: TTATCGACAA Locus tag: Pden_2922 Name: bioR Funciton: Biotin metabolism regulatory protein BioR, GntR family
	Pden_2922	bioR	Biotin metabolism regulatory protein BioR, GntR family
Position: -13 Score: 4.8 Sequence: TTATCTATAA Locus tag: Pden_1431 Name: bioR Funciton: Biotin metabolism regulatory protein BioR, GntR family
	Pden_1431	bioR	Biotin metabolism regulatory protein BioR, GntR family
Position: -80 Score: 4.2 Sequence: TAATAGATAA Position: -37 Score: 4.1 Sequence: TTATAGATAC Locus tag: Pden_2916 Name: bioB Funciton: Biotin synthase (EC 2.8.1.6) Locus tag: Pden_2917 Name: bioF Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Locus tag: Pden_2918 Name: bioD Funciton: Dethiobiotin synthetase (EC 6.3.3.3) Locus tag: Pden_2919 Name: bioA Funciton: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Locus tag: Pden_2920 Name: bioG Funciton: Biotin synthesis protein bioG Locus tag: Pden_2921 Name: bioC Funciton: Biotin synthesis protein bioC
	Pden_2916	bioB	Biotin synthase (EC 2.8.1.6)
	Pden_2917	bioF	8-amino-7-oxononanoate synthase (EC 2.3.1.47)
	Pden_2918	bioD	Dethiobiotin synthetase (EC 6.3.3.3)
	Pden_2919	bioA	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
	Pden_2920	bioG	Biotin synthesis protein bioG
	Pden_2921	bioC	Biotin synthesis protein bioC
Position: -84 Score: 4.8 Sequence: TTATCTATAA Position: -40 Score: 4.4 Sequence: TTATAGATAG Locus tag: Pden_1432 Name: bioY Funciton: Core component BioY of biotin ECF transporter Locus tag: Pden_1433 Name: bioB Funciton: Biotin synthase (EC 2.8.1.6)
	Pden_1432	bioY	Core component BioY of biotin ECF transporter
	Pden_1433	bioB	Biotin synthase (EC 2.8.1.6)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD