Regulon of AAur_4078 in Jonesia denitrificans DSM 20603
| Regulator type: | Transcription factor |
| TF locus tag: | Jden_0307 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Galactosides utilization |
| Effector: | |
| Regulog: | AAur_4078 - Micrococcineae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Micrococcineae
- By TF family - LacI
- By pathway - Galactosides utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -178
Score: 5.5 Sequence: CGCTGTGCGCGGTCACAGCC
Position: -89
Score: 5.5 Sequence: TCCTGTGACCGGTCACAGCG
Locus tag: Jden_0310
Name: SAV_1326 Funciton: Predicted galactosides ABC transporter, substrate-binding protein
Locus tag: Jden_0309
Name: SAV_1327 Funciton: Predicted galactosides ABC transporter, permease protein 1
Locus tag: Jden_0308
Name: SAV_1328 Funciton: Predicted galactosides ABC transporter, permease protein 2
Locus tag: Jden_0307
Name: SAV_1329 Funciton: Predicted galactosides utilization transcriptional regulator, LacI-family |
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SAV_1326
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Predicted galactosides ABC transporter, substrate-binding protein
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SAV_1327
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Predicted galactosides ABC transporter, permease protein 1
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SAV_1328
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Predicted galactosides ABC transporter, permease protein 2
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SAV_1329
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Predicted galactosides utilization transcriptional regulator, LacI-family
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Position: -213
Score: 6 Sequence: AACTGGGAGCGCGCACAGTC
Position: -135
Score: 5.5 Sequence: CCCTGTGACCGGTTACAGTA
Locus tag: Jden_0385
Name: ganA Funciton: Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89) |
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ganA
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Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
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Position: -154
Score: 5.5 Sequence: CGCTGTGACCGGTCACAGGA
Position: -65
Score: 5.5 Sequence: GGCTGTGACCGCGCACAGCG
Locus tag: Jden_0311
Name: lacA Funciton: Beta-galactosidase (EC 3.2.1.23) |
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lacA
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Beta-galactosidase (EC 3.2.1.23)
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Position: -136
Score: 5.8 Sequence: CACTGGGAGCGGGCACAGTT
Position: -49
Score: 5.1 Sequence: GTCTGTGACCGGTCACAGAC
Locus tag: Jden_2125
Name: ganA2 Funciton: Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89) |
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ganA2
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Arabinogalactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |