Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of BetI in Shewanella sediminis HAW-EB3

Properties
Regulator type: Transcription factor
TF locus tag: Ssed_1121
Regulator family: TetR
Regulation mode: repressor
Biological process: Osmotic stress response
Effector: Betaine
Regulog: BetI - Shewanellaceae
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -73
Score: 7.5
Sequence: TTAATTGAACGTTCAATTAA
Locus tag: Ssed_1121
Name: betI
Funciton: glycine betaine biosynthesis transcriptional regulator, TetR family
Locus tag: Ssed_1120
Name: betB
Funciton: Betaine aldehyde dehydrogenase (EC 1.2.1.8)
Locus tag: Ssed_1119
Name: betA
Funciton: Choline dehydrogenase (EC 1.1.99.1)
Locus tag: Ssed_1118
Name: betT
Funciton: Predicted choline transporter BetT, BCCT family
Locus tag: Ssed_1117
Name: Sbal_1327
Funciton: Conserved hypothetical protein 2001
betI
glycine betaine biosynthesis transcriptional regulator, TetR family
betB
Betaine aldehyde dehydrogenase (EC 1.2.1.8)
betA
Choline dehydrogenase (EC 1.1.99.1)
betT
Predicted choline transporter BetT, BCCT family
Sbal_1327
Conserved hypothetical protein 2001

Position: -360
Score: 7
Sequence: TTAATTGATCGTTCAATTAA
Locus tag: Ssed_1773
Name: betT2
Funciton: Predicted choline transporter BetT-II, BCCT family
betT2
Predicted choline transporter BetT-II, BCCT family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD