Regulon of BetI in Shewanella frigidimarina NCIMB 400
| Regulator type: | Transcription factor |
| TF locus tag: | Sfri_1948 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Osmotic stress response |
| Effector: | Betaine |
| Regulog: | BetI - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - TetR
- By effector - Betaine
- By pathway - Osmotic stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -51
Score: 7.2 Sequence: TTAATTGAGCGTTCAATTAA
Locus tag: Sfri_1948
Name: betI Funciton: glycine betaine biosynthesis transcriptional regulator, TetR family
Locus tag: Sfri_1947
Name: betB Funciton: Betaine aldehyde dehydrogenase (EC 1.2.1.8)
Locus tag: Sfri_1946
Name: betA Funciton: Choline dehydrogenase (EC 1.1.99.1)
Locus tag: Sfri_1945
Name: betT Funciton: Predicted choline transporter BetT, BCCT family
Locus tag: Sfri_1944
Name: Sbal_1327 Funciton: Conserved hypothetical protein 2001 |
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betI
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glycine betaine biosynthesis transcriptional regulator, TetR family
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betB
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Betaine aldehyde dehydrogenase (EC 1.2.1.8)
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betA
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Choline dehydrogenase (EC 1.1.99.1)
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betT
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Predicted choline transporter BetT, BCCT family
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Sbal_1327
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Conserved hypothetical protein 2001
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |