Regulon of ScrR in Pseudomonas fluorescens Pf-5
| Regulator type: | Transcription factor |
| TF locus tag: | PFL_3236 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sucrose utilization |
| Effector: | Sucrose |
| Regulog: | ScrR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - LacI
- By effector - Sucrose
- By pathway - Sucrose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -185
Score: 5.6 Sequence: TTAGGTTAACGTTAACATCG
Locus tag: PFL_3239
Name: scrY Funciton: Sucrose-specific outer membrane porin |
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scrY
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Sucrose-specific outer membrane porin
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Position: -42
Score: 5.6 Sequence: CGATGTTAACGTTAACCTAA
Locus tag: PFL_3238
Name: cscB Funciton: Sucrose permease, major facilitator superfamily
Locus tag: PFL_3237
Name: cscA Funciton: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Locus tag: PFL_3236
Name: scrR Funciton: Sucrose utilization transcriptional regulator, LacI family |
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cscB
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Sucrose permease, major facilitator superfamily
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cscA
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Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
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scrR
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Sucrose utilization transcriptional regulator, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |