Regulon of ExuR in Clostridium acetobutylicum ATCC 824

Properties
Regulator type:	Transcription factor
TF locus tag:	CAC0693
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Galacturonate utilization
Effector:	Galacturonate
Regulog:	ExuR - Clostridia-1
Statistics of regulated genes:
- Genes	14
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 20 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-1
By TF family - LacI
By effector - Galacturonate
By pathway - Galacturonate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -130 Score: 5.4 Sequence: AAATGTTCACGTGTTCAAAA Position: -42 Score: 5.2 Sequence: TTTTGAACACGTGAACGTAA Locus tag: CAC0695 Name: uxaB Funciton: Altronate oxidoreductase (EC 1.1.1.58) Locus tag: CAC0696 Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7)
	CAC0695	uxaB	Altronate oxidoreductase (EC 1.1.1.58)
	CAC0696	uxaA	Altronate hydrolase (EC 4.2.1.7)
Position: -121 Score: 5.7 Sequence: AGTTGTTCACGTTCACAAAA Locus tag: CAC0692 Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12) Locus tag: CAC0693 Name: exuR Funciton: Hexuronate utilization transcriptional repressor ExuR, LacI family Locus tag: CAC0694 Name: uxaT Funciton: Galacturonate transporter UxaT
	CAC0692	uxaC	Uronate isomerase (EC 5.3.1.12)
	CAC0693	exuR	Hexuronate utilization transcriptional repressor ExuR, LacI family
	CAC0694	uxaT	Galacturonate transporter UxaT
Position: -46 Score: 6.1 Sequence: AAATGTTAACGTTAACATAA Locus tag: CAP0056 Name: pell Funciton: Pectate lyase, secreted, polysaccharide lyase family
	CAP0056	pell	Pectate lyase, secreted, polysaccharide lyase family
Position: -51 Score: 5.3 Sequence: TTTTGTTAACGTTATCTGTA Position: -38 Score: 4.5 Sequence: ATCTGTATACGATAACAATT Locus tag: CAC2774 Name: mcp Funciton: Methyl-accepting chemotaxis protein with HAMP domain
	CAC2774	mcp	Methyl-accepting chemotaxis protein with HAMP domain
Position: -106 Score: 4.5 Sequence: TAATGTAATTGTTAACGTTA Position: -100 Score: 5.4 Sequence: AATTGTTAACGTTAAACAAA Position: -42 Score: 4.6 Sequence: TATGTTTATCGTAAACAAAA Locus tag: CAC0804 Name: pelA Funciton: Exopolygalacturonate lyase
	CAC0804	pelA	Exopolygalacturonate lyase
Position: -167 Score: 5.7 Sequence: GTTTGTTAACGATAACAATA Locus tag: CAC0812 Name: pelL Funciton: Pectate transeliminase, secreted
	CAC0812	pelL	Pectate transeliminase, secreted
Position: -195 Score: 5.7 Sequence: CTTTGTTAACGTTAACGTAA Position: -72 Score: 5.7 Sequence: TATTGATAACGTGAACACTA Locus tag: CAC0359 Name: rhiN Funciton: Rhamnogalacturonides degradation protein RhiN Locus tag: CAC0358 Name: PF01522 Funciton: Polysaccharide deacetylase Locus tag: CAC0357 Name: rhiT Funciton: Putative rhamnogalacturonide transporter Locus tag: CAC0356 Name: PF02589 Funciton: Domain of unknown function DUF162 Locus tag: CAC0355 Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15)
	CAC0359	rhiN	Rhamnogalacturonides degradation protein RhiN
	CAC0358	PF01522	Polysaccharide deacetylase
	CAC0357	rhiT	Putative rhamnogalacturonide transporter
	CAC0356	PF02589	Domain of unknown function DUF162
	CAC0355	pgl	Polygalacturonase (EC 3.2.1.15)

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of ExuR in Clostridium acetobutylicum ATCC 824

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --