Regulon of ExuR in Clostridium butyricum 5521

Properties
Regulator type:	Transcription factor
TF locus tag:	CBY_3741
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Galacturonate utilization
Effector:	Galacturonate
Regulog:	ExuR - Clostridia-1
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 20 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-1
By TF family - LacI
By effector - Galacturonate
By pathway - Galacturonate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -197 Score: 4.5 Sequence: TTTGGAAAACGTGTTCAATT Position: -96 Score: 5 Sequence: AAATGTGCACGTGTGCAAAA Locus tag: CBY_0243 Name: rhiN Funciton: Rhamnogalacturonides degradation protein RhiN Locus tag: CBY_0242 Name: PF02589 Funciton: Domain of unknown function DUF162 Locus tag: CBY_0241 Name: PF01522 Funciton: Polysaccharide deacetylase Locus tag: CBY_0240 Name: rhiT Funciton: Putative rhamnogalacturonide transporter Locus tag: CBY_0239 Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15)
	CBY_0243	rhiN	Rhamnogalacturonides degradation protein RhiN
	CBY_0242	PF02589	Domain of unknown function DUF162
	CBY_0241	PF01522	Polysaccharide deacetylase
	CBY_0240	rhiT	Putative rhamnogalacturonide transporter
	CBY_0239	pgl	Polygalacturonase (EC 3.2.1.15)
Position: -43 Score: 6 Sequence: AATTGTTAACGATAACAATA Locus tag: CBY_3715 Name: null Funciton: Pectate lyase, secreted, polysaccharide lyase family
	CBY_3715		Pectate lyase, secreted, polysaccharide lyase family
Position: -122 Score: 5.3 Sequence: AATTGTTAACGTTAAACTTA Position: -34 Score: 5.9 Sequence: AATTGTTAACGTTAACTATA Locus tag: CBY_2353 Name: pelX Funciton: Exopolygalacturonate lyase
	CBY_2353	pelX	Exopolygalacturonate lyase

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