Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of AgaR in Shewanella sp MR-4

Properties
Regulator type: Transcription factor
TF locus tag: Shewmr4_2536
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Regulog: AgaR - Shewanellaceae
Statistics of regulated genes:
- Genes 8
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -157
Score: 6.1
Sequence: GAAACTTTTTGAAAG
Locus tag: Shewmr4_2537
Name: omp_aga
Funciton: TonB-dependent receptor possibly related to N-acetylgalactosamine uptake through the outer membrane
omp_aga
TonB-dependent receptor possibly related to N-acetylgalactosamine uptake through the outer membrane

Position: -71
Score: 6
Sequence: GAAAGTGTTTGAAAG
Locus tag: Shewmr4_2536
Name: agaR
Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Locus tag: Shewmr4_2535
Name: agaO
Funciton: Secreted alpha-N-acetylgalactosaminidase (EC 3.2.1.49), GH109 family
Locus tag: Shewmr4_2534
Name: agaZ
Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Locus tag: Shewmr4_2533
Name: agaS
Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: Shewmr4_2532
Name: agaK
Funciton: N-acetylgalactosamine kinase, ROK-type (EC 2.7.1.157)
Locus tag: Shewmr4_2531
Name: agaA-II
Funciton: N-acetylgalactosamine-6-phosphate deacetylase, alternative (EC 3.5.1.25)
Locus tag: Shewmr4_2530
Name: agaP
Funciton: Predicted N-acetylgalactosamine permease, GGP family
agaR
Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
agaO
Secreted alpha-N-acetylgalactosaminidase (EC 3.2.1.49), GH109 family
agaZ
Tagatose-6-phosphate kinase (EC 2.7.1.144)
agaS
Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
agaK
N-acetylgalactosamine kinase, ROK-type (EC 2.7.1.157)
agaA-II
N-acetylgalactosamine-6-phosphate deacetylase, alternative (EC 3.5.1.25)
agaP
Predicted N-acetylgalactosamine permease, GGP family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD