Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator AgaR in Shewanellaceae

Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Regulog: AgaR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella sp ANA-3
Shewana3_2703 omp_aga -157 6.1 GAAACTTTTTGAAAG
Shewana3_2702 agaR -71 5.7 GAAAGTGTTTGAAGG
Shewanella sp MR-4
Shewmr4_2536 agaR -71 6 GAAAGTGTTTGAAAG
Shewmr4_2537 omp_aga -157 6.1 GAAACTTTTTGAAAG
Shewanella sp MR-7
Shewmr7_2604 omp_aga -157 6.1 GAAACTTTTTGAAAG
Shewmr7_2603 agaR -71 6 GAAAGTGTTTGAAAG
Shewanella amazonensis SB2B
Sama_1192 omp_aga -151 4.6 GAAAGAAAATAAAAG
Sama_1193 agaR -67 5.6 GAAACCTATTGAAAG
Regulatory Sites [ FASTA format ] DOWNLOAD