Regulon of GalR in Alteromonas macleodii 'Deep ecotype'

Properties
Regulator type:	Transcription factor
TF locus tag:	MADE_00229
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Galactose utilization
Effector:	Galactose
Regulog:	GalR - Alteromonadales
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By TF family - LacI
By effector - Galactose
By pathway - Galactose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -136 Score: 6.4 Sequence: TAGGGTAAACGTTTAACCCT Locus tag: MADE_00231 Name: galT Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) Locus tag: MADE_00232 Name: galK Funciton: Galactokinase (EC 2.7.1.6)
	MADE_00231	galT	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)
	MADE_00232	galK	Galactokinase (EC 2.7.1.6)
Position: -123 Score: 5.3 Sequence: AACGGAAAACGTATAACCTC Locus tag: MADE_00230 Name: galM Funciton: Aldose 1-epimerase (EC 5.1.3.3)
	MADE_00230	galM	Aldose 1-epimerase (EC 5.1.3.3)
Position: -140 Score: 6.1 Sequence: TATGGTAAACGTTTACCCAA Locus tag: MADE_00241 Name: omp_Gal Funciton: Predicted galactose-specific outer membrane transporter, TonB-dependent Locus tag: MADE_00239 Name: lacZ Funciton: Beta-galactosidase (EC 3.2.1.23)
	MADE_00241	omp_Gal	Predicted galactose-specific outer membrane transporter, TonB-dependent
	MADE_00239	lacZ	Beta-galactosidase (EC 3.2.1.23)
Position: -169 Score: 5.3 Sequence: GAGGTTATACGTTTTCCGTT Locus tag: MADE_00229 Name: galR Funciton: Transcriptional regulator for galactose utilization, LacI family
	MADE_00229	galR	Transcriptional regulator for galactose utilization, LacI family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD