Regulon of CadR-PbrR in Roseobacter sp. MED193
| Regulator type: | Transcription factor |
| TF locus tag: | MED193_02240, MED193_15022 |
| Regulator family: | MerR |
| Regulation mode: | activator |
| Biological process: | Lead resistance; Cadmium resistance |
| Effector: | Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
| Regulog: | CadR-PbrR - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - CadR-PbrR
- By TF family - MerR
- By effector - Lead ion, (Pb2+)
- By effector - Cadmium, ion (Cd2+)
- By pathway - Lead resistance
- By pathway - Cadmium resistance
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -117
Score: 6.2 Sequence: ATCCTCTAGCTACTAGAGGTT
Locus tag: MED193_02240
Name: cadR Funciton: Cadmium resistance transcriptional regulator, MerR family
Locus tag: MED193_02245
Name: PF02694 Funciton: Protein of unknown function UPF0060
Locus tag: MED193_02250
Name: czcD Funciton: Co/Zn/Cd efflux protein |
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cadR
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Cadmium resistance transcriptional regulator, MerR family
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PF02694
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Protein of unknown function UPF0060
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czcD
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Co/Zn/Cd efflux protein
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Position: -88
Score: 5.6 Sequence: AACCTCTAGCCACTAGAAGTC
Locus tag: MED193_02170
Name: PF03734 Funciton: hypothetical protein |
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PF03734
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hypothetical protein
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Position: -58
Score: 5.9 Sequence: AACCTCTAGTCACTGTAGGTC
Locus tag: MED193_15017
Name: cadA Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3)
Locus tag: MED193_15022
Name: cadR2 Funciton: Cadmium resistance transcriptional regulator, MerR family |
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cadA
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Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3)
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cadR2
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Cadmium resistance transcriptional regulator, MerR family
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Position: -57
Score: 4.9 Sequence: AAGCTACAGTAACTATAGAGA
Locus tag: MED193_02255
Name: PF01841 Funciton: Transglutaminase-like protein
Locus tag: MED193_02260
Name: czcD2 Funciton: Co/Zn/Cd efflux protein |
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PF01841
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Transglutaminase-like protein
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czcD2
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Co/Zn/Cd efflux protein
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Position: -60
Score: 5.2 Sequence: AAGCTCTAGCTACTGTAGGGG
Locus tag: MED193_02180
Name: cadA Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) |
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cadA
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Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |