Regulon of CadR-PbrR in Oceanicola batsensis HTCC2597
| Regulator type: | Transcription factor |
| TF locus tag: | OB2597_16642, OB2597_05245, OB2597_16332, OB2597_04875 |
| Regulator family: | MerR |
| Regulation mode: | activator |
| Biological process: | Lead resistance; Cadmium resistance |
| Effector: | Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
| Regulog: | CadR-PbrR - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - CadR-PbrR
- By TF family - MerR
- By effector - Lead ion, (Pb2+)
- By effector - Cadmium, ion (Cd2+)
- By pathway - Lead resistance
- By pathway - Cadmium resistance
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -124
Score: 5.1 Sequence: AAGCTACAGTGGGTAGAGGTT
Position: -45
Score: 4.9 Sequence: AAGCTACAGTCGCTGTAGCAA
Locus tag: OB2597_05245
Name: cadR2 Funciton: Cadmium resistance transcriptional regulator, MerR family
Locus tag: OB2597_05250
Name: PF02694 Funciton: Protein of unknown function UPF0060
Locus tag: OB2597_05255
Name: PF01841 Funciton: Transglutaminase-like protein
Locus tag: OB2597_05260
Name: czcD3 Funciton: Co/Zn/Cd efflux protein |
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cadR2
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Cadmium resistance transcriptional regulator, MerR family
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PF02694
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Protein of unknown function UPF0060
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PF01841
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Transglutaminase-like protein
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czcD3
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Co/Zn/Cd efflux protein
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Position: -150
Score: 5.3 Sequence: AACCTCTAGTAGCTTTAGGAG
Locus tag: OB2597_16567
Name: PF03734 Funciton: hypothetical protein |
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PF03734
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hypothetical protein
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Position: -134
Score: 5.7 Sequence: ATCCTCTAGCTACTGTAGGTT
Locus tag: OB2597_16642
Name: cadR Funciton: Cadmium resistance transcriptional regulator, MerR family
Locus tag: OB2597_16647
Name: czcD Funciton: Co/Zn/Cd efflux protein |
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cadR
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Cadmium resistance transcriptional regulator, MerR family
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czcD
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Co/Zn/Cd efflux protein
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Position: -57
Score: 5.1 Sequence: AAGCTACAGTGACTGTAGCAA
Locus tag: OB2597_16652
Name: PF01841 Funciton: Transglutaminase-like protein
Locus tag: OB2597_16657
Name: czcD2 Funciton: Co/Zn/Cd efflux protein
Locus tag: OB2597_16662
Name: PF11964 Funciton: hypothetical protein |
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PF01841
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Transglutaminase-like protein
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czcD2
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Co/Zn/Cd efflux protein
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PF11964
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hypothetical protein
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Position: -228
Score: 5.3 Sequence: AAGCTCTAGTTACTGTAGGGG
Locus tag: OB2597_16572
Name: cadA Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) |
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cadA
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Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3)
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Position: -62
Score: 5 Sequence: AACCTACAGTTGCTGTAGGTC
Locus tag: OB2597_05215
Name: cadA Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3)
Locus tag: OB2597_05210
Name: copG Funciton: Predicted metal binding protein |
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cadA
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Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3)
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copG
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Predicted metal binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |