Regulon of CadR-PbrR in Shewanella sp W3-18-1
| Regulator type: | Transcription factor |
| TF locus tag: | Sputw3181_0521, Sputw3181_0438, Sputw3181_0413, Sputw3181_1170 |
| Regulator family: | MerR |
| Regulation mode: | activator |
| Biological process: | Lead resistance; Cadmium resistance |
| Effector: | Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
| Regulog: | CadR-PbrR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - CadR-PbrR
- By TF family - MerR
- By effector - Lead ion, (Pb2+)
- By effector - Cadmium, ion (Cd2+)
- By pathway - Lead resistance
- By pathway - Cadmium resistance
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -61
Score: 5.6 Sequence: ACCTTATAGTGACTTTATAGT
Locus tag: Sputw3181_0414
Name: czcD2 Funciton: Co/Zn/Cd efflux protein
Locus tag: Sputw3181_0415
Name: lspA Funciton: Lipoprotein signal peptidase (EC 3.4.23.36) |
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czcD2
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Co/Zn/Cd efflux protein
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lspA
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Lipoprotein signal peptidase (EC 3.4.23.36)
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Position: -61
Score: 5.6 Sequence: ACCTTATAGTGACTTTATAGT
Locus tag: Sputw3181_0439
Name: czcD2 Funciton: Co/Zn/Cd efflux protein
Locus tag: Sputw3181_0440
Name: lspA Funciton: Lipoprotein signal peptidase (EC 3.4.23.36) |
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czcD2
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Co/Zn/Cd efflux protein
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lspA
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Lipoprotein signal peptidase (EC 3.4.23.36)
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Position: -59
Score: 6.4 Sequence: ACTCTATAGTAACTACAGAGT
Locus tag: Sputw3181_1169
Name: czcD Funciton: Co/Zn/Cd efflux protein
Locus tag: Sputw3181_1168
Name: null Funciton: hypothetical protein
Locus tag: Sputw3181_1167
Name: czcC Funciton: Heavy metal RND efflux outer membrane protein
Locus tag: Sputw3181_1166
Name: czcB Funciton: Heavy metal efflux RND transporter, membrane fusion protein
Locus tag: Sputw3181_1165
Name: czcA Funciton: Heavy metal efflux RND transmembrane protein |
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czcD
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Co/Zn/Cd efflux protein
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hypothetical protein
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czcC
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Heavy metal RND efflux outer membrane protein
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czcB
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Heavy metal efflux RND transporter, membrane fusion protein
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czcA
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Heavy metal efflux RND transmembrane protein
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Position: -61
Score: 5.6 Sequence: ACCTTATAGTGACTTTATAGT
Locus tag: Sputw3181_0520
Name: czcD2 Funciton: Co/Zn/Cd efflux protein
Locus tag: Sputw3181_0519
Name: lspA Funciton: Lipoprotein signal peptidase (EC 3.4.23.36) |
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czcD2
|
Co/Zn/Cd efflux protein
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lspA
|
Lipoprotein signal peptidase (EC 3.4.23.36)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |