Regulon of CadR-PbrR in Shewanella putrefaciens CN-32
| Regulator type: | Transcription factor |
| TF locus tag: | Sputcn32_0220, Sputcn32_0194, Sputcn32_1973, Sputcn32_0230 |
| Regulator family: | MerR |
| Regulation mode: | activator |
| Biological process: | Lead resistance; Cadmium resistance |
| Effector: | Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
| Regulog: | CadR-PbrR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - CadR-PbrR
- By TF family - MerR
- By effector - Lead ion, (Pb2+)
- By effector - Cadmium, ion (Cd2+)
- By pathway - Lead resistance
- By pathway - Cadmium resistance
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -59
Score: 6.4 Sequence: ACTCTATAGTAACTACAGAGT
Locus tag: Sputcn32_1972
Name: czcD Funciton: Co/Zn/Cd efflux protein
Locus tag: Sputcn32_1971
Name: null Funciton: hypothetical protein
Locus tag: Sputcn32_1970
Name: czcC Funciton: Heavy metal RND efflux outer membrane protein
Locus tag: Sputcn32_1969
Name: czcB Funciton: Heavy metal efflux RND transporter, membrane fusion protein
Locus tag: Sputcn32_1968
Name: czcA Funciton: Heavy metal efflux RND transmembrane protein
Locus tag: Sputcn32_1967
Name: null Funciton: hypothetical protein
Locus tag: Sputcn32_1966
Name: cadA Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) |
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czcD
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Co/Zn/Cd efflux protein
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hypothetical protein
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czcC
|
Heavy metal RND efflux outer membrane protein
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czcB
|
Heavy metal efflux RND transporter, membrane fusion protein
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czcA
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Heavy metal efflux RND transmembrane protein
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hypothetical protein
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cadA
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Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3)
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Position: -59
Score: 6.4 Sequence: ACTCTATAGTAACTACAGAGT
Locus tag: Sputcn32_0229
Name: czcD Funciton: Co/Zn/Cd efflux protein
Locus tag: Sputcn32_0228
Name: null Funciton: hypothetical protein
Locus tag: Sputcn32_0227
Name: czcC Funciton: Heavy metal RND efflux outer membrane protein
Locus tag: Sputcn32_0226
Name: czcB Funciton: Heavy metal efflux RND transporter, membrane fusion protein
Locus tag: Sputcn32_0225
Name: czcA Funciton: Heavy metal efflux RND transmembrane protein |
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czcD
|
Co/Zn/Cd efflux protein
|
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hypothetical protein
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czcC
|
Heavy metal RND efflux outer membrane protein
|
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czcB
|
Heavy metal efflux RND transporter, membrane fusion protein
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czcA
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Heavy metal efflux RND transmembrane protein
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Position: -61
Score: 5.6 Sequence: ACCTTATAGTGACTTTATAGT
Locus tag: Sputcn32_0195
Name: czcD2 Funciton: Co/Zn/Cd efflux protein
Locus tag: Sputcn32_0196
Name: lspA Funciton: Lipoprotein signal peptidase (EC 3.4.23.36) |
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czcD2
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Co/Zn/Cd efflux protein
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lspA
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Lipoprotein signal peptidase (EC 3.4.23.36)
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Position: -61
Score: 5.6 Sequence: ACCTTATAGTGACTTTATAGT
Locus tag: Sputcn32_0221
Name: czcD2 Funciton: Co/Zn/Cd efflux protein
Locus tag: Sputcn32_0222
Name: lspA Funciton: Lipoprotein signal peptidase (EC 3.4.23.36) |
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czcD2
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Co/Zn/Cd efflux protein
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lspA
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Lipoprotein signal peptidase (EC 3.4.23.36)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |