Regulon of CueR in Ralstonia pickettii 12J
| Regulator type: | Transcription factor |
| TF locus tag: | Rpic_3542, Rpic_1805 |
| Regulator family: | MerR |
| Regulation mode: | activator (repressor) |
| Biological process: | Copper resistance |
| Effector: | Copper ion, (Cu+) |
| Regulog: | CueR - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - CueR
- By TF family - MerR
- By effector - Copper ion, (Cu+)
- By pathway - Copper resistance
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -66
Score: 5.1 Sequence: CACTTCCCACGATGGGAAGGT
Locus tag: Rpic_3544
Name: copZ Funciton: Copper chaperone |
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copZ
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Copper chaperone
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Position: -100
Score: 5.1 Sequence: ACCTTCCCATCGTGGGAAGTG
Locus tag: Rpic_3543
Name: copA Funciton: Copper-translocating P-type ATPase (EC 3.6.3.4)
Locus tag: Rpic_3542
Name: cueR Funciton: Copper-responsive transcriptional regulator, MerR family |
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copA
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Copper-translocating P-type ATPase (EC 3.6.3.4)
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cueR
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Copper-responsive transcriptional regulator, MerR family
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Position: -125
Score: 4.9 Sequence: ACCTTCCCACGTGGGCAGGCT
Locus tag: Rpic_1805
Name: cueR2 Funciton: Copper-responsive transcriptional regulator, MerR family
Locus tag: Rpic_1804
Name: copA2 Funciton: Copper-translocating P-type ATPase (EC 3.6.3.4) |
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cueR2
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Copper-responsive transcriptional regulator, MerR family
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copA2
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Copper-translocating P-type ATPase (EC 3.6.3.4)
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Position: -156
Score: 5.3 Sequence: ACCTTCCCTCCGTGGAAAGGT
Locus tag: Rpic_4609
Name: copA2 Funciton: Copper-translocating P-type ATPase (EC 3.6.3.4) |
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copA2
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Copper-translocating P-type ATPase (EC 3.6.3.4)
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Position: -116
Score: 5.7 Sequence: ACGTTGCCATTGTGGGAAGGT
Locus tag: Rpic_1651
Name: null Funciton: hypothetical protein
Locus tag: Rpic_1650
Name: null Funciton: hypothetical protein
Locus tag: Rpic_1649
Name: cusD Funciton: Heavy metal efflux RND transmembrane protein
Locus tag: Rpic_1648
Name: cusC Funciton: Heavy metal efflux RND outer membrane protein, CzcC family
Locus tag: Rpic_1647
Name: cusB Funciton: Heavy metal efflux RND transporter, membrane fusion protein, CzcB family
Locus tag: Rpic_1646
Name: cusA Funciton: Heavy metal efflux RND transmembrane protein, CzcA family
Locus tag: Rpic_1645
Name: cusF Funciton: Heavy metal efflux RND periplasmic protein |
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hypothetical protein
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hypothetical protein
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cusD
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Heavy metal efflux RND transmembrane protein
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cusC
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Heavy metal efflux RND outer membrane protein, CzcC family
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cusB
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Heavy metal efflux RND transporter, membrane fusion protein, CzcB family
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cusA
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Heavy metal efflux RND transmembrane protein, CzcA family
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cusF
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Heavy metal efflux RND periplasmic protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |