Regulon of SmoR in Paracoccus denitrificans PD1222
| Regulator type: | Transcription factor |
| TF locus tag: | Pden_4846 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Sorbitol utilization; Mannitol utilization |
| Effector: | Sorbitol |
| Regulog: | SmoR - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - LacI
- By effector - Sorbitol
- By pathway - Sorbitol utilization
- By pathway - Mannitol utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -54
Score: 4.6 Sequence: GTCTTTACGCGAGACAATAT
Locus tag: Pden_4846
Name: smoR Funciton: Transcriptional regulator for sorbitol and mannitol utilization, LacI family |
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smoR
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Transcriptional regulator for sorbitol and mannitol utilization, LacI family
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Position: -122
Score: 5.4 Sequence: AATTTGACACGCGTAAAATA
Locus tag: Pden_4851
Name: Pden_4851 Funciton: Putative sugar polyol ABC transporter, substrate-binding component
Locus tag: Pden_4850
Name: Pden_4850 Funciton: Putative sugar polyol ABC transporter, ATP-binding protein
Locus tag: Pden_4849
Name: Pden_4849 Funciton: Putative sugar polyol ABC transporter, permease components
Locus tag: Pden_4848
Name: scrK Funciton: Fructokinase (EC 2.7.1.4)
Locus tag: Pden_4847
Name: pfkZ Funciton: 6-phosphofructokinase (EC 2.7.1.11), PF08013 family |
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Pden_4851
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Putative sugar polyol ABC transporter, substrate-binding component
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Pden_4850
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Putative sugar polyol ABC transporter, ATP-binding protein
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Pden_4849
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Putative sugar polyol ABC transporter, permease components
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scrK
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Fructokinase (EC 2.7.1.4)
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pfkZ
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6-phosphofructokinase (EC 2.7.1.11), PF08013 family
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Position: -87
Score: 5.8 Sequence: AATTTTTCGCGCGTAAAAAT
Locus tag: Pden_4845
Name: smoE Funciton: Various polyols ABC transporter, substrate-binding protein
Locus tag: Pden_4844
Name: smoF Funciton: Various polyols ABC transporter, inner membrane component 1
Locus tag: Pden_4843
Name: smoG Funciton: ABC sorbitol/mannitol transporter, inner membrane component 2
Locus tag: Pden_4842
Name: smoK Funciton: Various polyols ABC transporter, ATP-binding component
Locus tag: Pden_4841
Name: smoS Funciton: Sorbitol dehydrogenase (EC 1.1.1.14)
Locus tag: Pden_4840
Name: smoD Funciton: Putative mannitol dehydrogenase (EC 1.1.1.67), similar to arabinitol dehydrogenase |
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smoE
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Various polyols ABC transporter, substrate-binding protein
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smoF
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Various polyols ABC transporter, inner membrane component 1
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smoG
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ABC sorbitol/mannitol transporter, inner membrane component 2
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smoK
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Various polyols ABC transporter, ATP-binding component
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smoS
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Sorbitol dehydrogenase (EC 1.1.1.14)
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smoD
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Putative mannitol dehydrogenase (EC 1.1.1.67), similar to arabinitol dehydrogenase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |