Regulon of AraC in Yersinia pestis KIM
| Regulator type: | Transcription factor |
| TF locus tag: | y2100 |
| Regulator family: | AraC |
| Regulation mode: | activator (repressor) |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Regulog: | AraC - Enterobacterales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - AraC
- By effector - Arabinose
- By pathway - Arabinose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -189
Score: 7.8 Sequence: CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG
Position: -114
Score: 7.5 Sequence: AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA
Locus tag: y2095
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: y2094
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
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araB
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Ribulokinase (EC 2.7.1.16)
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araA
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L-arabinose isomerase (EC 5.3.1.4)
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Position: -331
Score: 7.5 Sequence: TGAGGAGCCAATAGCTG-(4)-TATGCACTTTTCTGCTT
Position: -256
Score: 7.8 Sequence: CGAGGTTAAATTTGCTG-(4)-TATGGATAAATAAACTG
Locus tag: y2096
Name: araF Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: y2097
Name: araG Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: y2098
Name: araH Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: y2100
Name: araC Funciton: Arabinose operon regulatory protein, AraC family |
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araF
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L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
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araG
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L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
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araH
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L-arabinose transport system permease protein (TC 3.A.1.2.2)
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araC
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Arabinose operon regulatory protein, AraC family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |