Regulon of AraC in Salmonella typhimurium LT2

Properties
Regulator type:	Transcription factor
TF locus tag:	STM0104
Regulator family:	AraC
Regulation mode:	activator (repressor)
Biological process:	Arabinose utilization
Effector:	Arabinose
Regulog:	AraC - Enterobacterales
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 56 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - AraC
By effector - Arabinose
By pathway - Arabinose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -279 Score: 8.1 Sequence: TCAGGCAGGATCCGCTA-(4)-TATGGACAAAAATGCTA Position: -205 Score: 8.4 Sequence: TGTGGACATTCCAGCCA-(4)-TATAGACACTTCTGTTA Locus tag: STM0104 Name: araC Funciton: Arabinose operon regulatory protein, AraC family
	STM0104	araC	Arabinose operon regulatory protein, AraC family
Position: -99 Score: 6.9 Sequence: TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA Locus tag: STM3016 Name: araE Funciton: Low-affinity L-arabinose transport system proton symport protein
	STM3016	araE	Low-affinity L-arabinose transport system proton symport protein
Position: -173 Score: 8.4 Sequence: TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA Position: -99 Score: 8.1 Sequence: TAGCATTTTTGTCCATA-(4)-TAGCGGATCCTGCCTGA Locus tag: STM0103 Name: araB Funciton: Ribulokinase (EC 2.7.1.16) Locus tag: STM0102 Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) Locus tag: STM0101 Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
	STM0103	araB	Ribulokinase (EC 2.7.1.16)
	STM0102	araA	L-arabinose isomerase (EC 5.3.1.4)
	STM0101	araD	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Position: -134 Score: 7.1 Sequence: TAGCATAATAATGAATA-(4)-AAGACGGATAAGGAATG Locus tag: STM0394 Name: araJ Funciton: Protein AraJ precursor
	STM0394	araJ	Protein AraJ precursor

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD