Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of AraC in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type: Transcription factor
TF locus tag: b0064
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Regulog: AraC - Enterobacterales
Statistics of regulated genes:
- Genes 11
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 56 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -284
Score: 8.6
Sequence: CAAGGATTTCCAGGCTA-(4)-TATGGATTAATCTGCTG
Position: -209
Score: 7.6
Sequence: TATGTCTTTTCCCGCTA-(4)-TATGCACGTTCTCACTG
Locus tag: b1901
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: b1900
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: b4460
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
araF
L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
araG
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
araH
L-arabinose transport system permease protein (TC 3.A.1.2.2)

Position: -277
Score: 8
Sequence: TCAGGTAGGATCCGCTA-(4)-TATGGATAAAAATGCTA
Position: -203
Score: 8.7
Sequence: TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA
Locus tag: b0064
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC
Arabinose operon regulatory protein, AraC family

Position: -188
Score: 7.8
Sequence: GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Locus tag: b4227
Name: ytfQ
Funciton: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Locus tag: b4485
Name: ytfR
Funciton: Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
Locus tag: b4230
Name: ytfT
Funciton: Galactose/arabinose ABC transport system, permease protein YtfT
Locus tag: b4231
Name: yjfF
Funciton: Galactose/arabinose ABC transport system, permease protein YjfF
ytfQ
Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
ytfR
Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
ytfT
Galactose/arabinose ABC transport system, permease protein YtfT
yjfF
Galactose/arabinose ABC transport system, permease protein YjfF

Position: -173
Score: 8.7
Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
Position: -99
Score: 8
Sequence: TAGCATTTTTATCCATA-(4)-TAGCGGATCCTACCTGA
Locus tag: b0063
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: b0062
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: b0061
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB
Ribulokinase (EC 2.7.1.16)
araA
L-arabinose isomerase (EC 5.3.1.4)
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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