Regulon of AraC in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type:	Transcription factor
TF locus tag:	b0064
Regulator family:	AraC
Regulation mode:	activator (repressor)
Biological process:	Arabinose utilization
Effector:	Arabinose
Regulog:	AraC - Enterobacterales
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 56 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - AraC
By effector - Arabinose
By pathway - Arabinose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -284 Score: 8.6 Sequence: CAAGGATTTCCAGGCTA-(4)-TATGGATTAATCTGCTG Position: -209 Score: 7.6 Sequence: TATGTCTTTTCCCGCTA-(4)-TATGCACGTTCTCACTG Locus tag: b1901 Name: araF Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) Locus tag: b1900 Name: araG Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) Locus tag: b4460 Name: araH Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
	b1901	araF	L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
	b1900	araG	L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
	b4460	araH	L-arabinose transport system permease protein (TC 3.A.1.2.2)
Position: -277 Score: 8 Sequence: TCAGGTAGGATCCGCTA-(4)-TATGGATAAAAATGCTA Position: -203 Score: 8.7 Sequence: TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA Locus tag: b0064 Name: araC Funciton: Arabinose operon regulatory protein, AraC family
	b0064	araC	Arabinose operon regulatory protein, AraC family
Position: -188 Score: 7.8 Sequence: GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA Locus tag: b4227 Name: ytfQ Funciton: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor Locus tag: b4485 Name: ytfR Funciton: Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17) Locus tag: b4230 Name: ytfT Funciton: Galactose/arabinose ABC transport system, permease protein YtfT Locus tag: b4231 Name: yjfF Funciton: Galactose/arabinose ABC transport system, permease protein YjfF
	b4227	ytfQ	Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
	b4485	ytfR	Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
	b4230	ytfT	Galactose/arabinose ABC transport system, permease protein YtfT
	b4231	yjfF	Galactose/arabinose ABC transport system, permease protein YjfF
Position: -173 Score: 8.7 Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA Position: -99 Score: 8 Sequence: TAGCATTTTTATCCATA-(4)-TAGCGGATCCTACCTGA Locus tag: b0063 Name: araB Funciton: Ribulokinase (EC 2.7.1.16) Locus tag: b0062 Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) Locus tag: b0061 Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
	b0063	araB	Ribulokinase (EC 2.7.1.16)
	b0062	araA	L-arabinose isomerase (EC 5.3.1.4)
	b0061	araD	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD