Regulon of AraC in Enterobacter sp. 638
| Regulator type: | Transcription factor |
| TF locus tag: | Ent638_0611 |
| Regulator family: | AraC |
| Regulation mode: | activator (repressor) |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Regulog: | AraC - Enterobacterales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - AraC
- By effector - Arabinose
- By pathway - Arabinose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -276
Score: 8.1 Sequence: TCAGGCAGGATCCGCTA-(4)-TATGGATTAAATTGCTG
Position: -202
Score: 8.6 Sequence: TGTGGACATTTCTGCCG-(4)-TATAGACACTTTTGTTA
Locus tag: Ent638_0611
Name: araC Funciton: Arabinose operon regulatory protein, AraC family |
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araC
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Arabinose operon regulatory protein, AraC family
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Position: -283
Score: 7.6 Sequence: CAGGGACTTCTTAGCTG-(4)-TATGGATAATCTTGCTT
Position: -208
Score: 7.1 Sequence: TATGTCATTTCTCGCTG-(4)-TATGCACGCAATTACTG
Locus tag: Ent638_2476
Name: araF Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: Ent638_2475
Name: araG Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: Ent638_2474
Name: araH Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2) |
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araF
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L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
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araG
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L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
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araH
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L-arabinose transport system permease protein (TC 3.A.1.2.2)
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Position: -172
Score: 8.6 Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAATGTCCACA
Position: -98
Score: 8.1 Sequence: CAGCAATTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Locus tag: Ent638_0610
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Ent638_0609
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Ent638_0608
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
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araB
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Ribulokinase (EC 2.7.1.16)
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araA
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L-arabinose isomerase (EC 5.3.1.4)
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araD
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L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
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Position: -189
Score: 7.3 Sequence: TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG
Locus tag: Ent638_0412
Name: ytfQ Funciton: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Locus tag: Ent638_0413
Name: ytfR Funciton: Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
Locus tag: Ent638_0414
Name: ytfT Funciton: Galactose/arabinose ABC transport system, permease protein YtfT
Locus tag: Ent638_0415
Name: yjfF Funciton: Galactose/arabinose ABC transport system, permease protein YjfF |
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ytfQ
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Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
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ytfR
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Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
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ytfT
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Galactose/arabinose ABC transport system, permease protein YtfT
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yjfF
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Galactose/arabinose ABC transport system, permease protein YjfF
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Position: -179
Score: 4.6 Sequence: TATAAATTAAGTATTTA-(4)-TAAATGATGATTATTCA
Position: -158
Score: 4.8 Sequence: TAAATGATGATTATTCA-(4)-AAGTTTAAATTGGAATA
Locus tag: Ent638_3294
Name: araE Funciton: Low-affinity L-arabinose transport system proton symport protein |
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araE
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Low-affinity L-arabinose transport system proton symport protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |