Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PckR in Brucella melitensis 16M

Properties
Regulator type: Transcription factor
TF locus tag: BMEII0312
Regulator family: LacI
Regulation mode: repressor
Biological process: Central carbohydrate metabolism
Effector:
Regulog: PckR - Rhizobiales
Statistics of regulated genes:
- Genes 14
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 99 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -94
Score: 5.5
Sequence: AATTTAAATCGATTAGATAT
Locus tag: BMEII0513
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: BMEII0512
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: BMEII0511
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
edd
Phosphogluconate dehydratase (EC 4.2.1.12)

Position: -59
Score: 4.9
Sequence: GATTTAAAACGATTTAGCCG
Locus tag: BMEII0252
Name: mgsA
Funciton: Methylglyoxal synthase (EC 4.2.3.3)
Locus tag: BMEII0251
Name: glk
Funciton: Glucokinase (EC 2.7.1.2)
mgsA
Methylglyoxal synthase (EC 4.2.3.3)
glk
Glucokinase (EC 2.7.1.2)

Position: -75
Score: 5.4
Sequence: GATTTAAATCGATTTATAAG
Locus tag: BMEII0009
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) / 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16)
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) / 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16)

Position: -155
Score: 5
Sequence: AAATCTAACCGATTGAAAAC
Locus tag: BMEI0137
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: BMEI0138
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: BMEI0139
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
mdh
Malate dehydrogenase (EC 1.1.1.37)
sucC
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
sucD
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)

Position: -149
Score: 4.6
Sequence: CGGGTTAAACGATTTAAAAA
Position: -120
Score: 5.8
Sequence: ATTTTAAATCGATTAAATAT
Locus tag: BMEI2037
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)

Position: -158
Score: 4.6
Sequence: GCTCTAAATCGATTAAGGCT
Locus tag: BMEI0726
Name: glpX
Funciton: Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)
glpX
Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)

Position: -32
Score: 5.4
Sequence: AGATTAAATCGATTTGATTC
Locus tag: BMEI1636
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)

Position: -47
Score: 5.5
Sequence: ATTTTCAATCGATTTAACAG
Locus tag: BMEI1833
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
scrK
Fructokinase (EC 2.7.1.4)

Position: -59
Score: 5
Sequence: GAATTAAATGGTTTTAAATT
Locus tag: BMEI0244
Name: null
Funciton: Transaldolase (EC 2.2.1.2)
Transaldolase (EC 2.2.1.2)
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