Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PckR in Mesorhizobium sp. BNC1

Properties
Regulator type: Transcription factor
TF locus tag: Meso_2846
Regulator family: LacI
Regulation mode: repressor
Biological process: Central carbohydrate metabolism
Effector:
Regulog: PckR - Rhizobiales
Statistics of regulated genes:
- Genes 17
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 99 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -40
Score: 4.8
Sequence: AGCTTCAATCGATTTAGGAG
Locus tag: Meso_3595
Name: mgsA
Funciton: Methylglyoxal synthase (EC 4.2.3.3)
Locus tag: Meso_3594
Name: glk
Funciton: Glucokinase (EC 2.7.1.2)
Meso_3595
mgsA
Methylglyoxal synthase (EC 4.2.3.3)
Meso_3594
glk
Glucokinase (EC 2.7.1.2)
Position: -157
Score: 4.7
Sequence: AACTTCAATCGATTCAGTCG
Locus tag: Meso_3246
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Meso_3245
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Meso_3244
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Meso_3243
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Meso_3246
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
Meso_3245
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
Meso_3244
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Meso_3243
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -158
Score: 5
Sequence: CCATCTAAACGATTGAAAAA
Locus tag: Meso_3395
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Meso_3396
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Meso_3397
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: Meso_3398
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Meso_3399
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Meso_3395
mdh
Malate dehydrogenase (EC 1.1.1.37)
Meso_3396
sucC
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Meso_3397
sucD
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Meso_3398
sucA
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Meso_3399
sucB
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Position: -53
Score: 5.2
Sequence: TTATTAAATCGATTAGACTA
Locus tag: Meso_0159
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: Meso_0158
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: Meso_0157
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Meso_0159
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Meso_0158
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Meso_0157
edd
Phosphogluconate dehydratase (EC 4.2.1.12)
Position: -86
Score: 4.8
Sequence: CATTTCAATCGATTAGGGAG
Locus tag: Meso_3436
Name: fba
Funciton: Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
Meso_3436
fba
Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
Position: -162
Score: 4.5
Sequence: GCGTTTAAACGATTTAGTGA
Position: -132
Score: 5.5
Sequence: TTTTTAAATCGATTAAAGAA
Locus tag: Meso_3502
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
Meso_3502
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
Position: -129
Score: 5
Sequence: TTATTCAATCGATTCATATT
Locus tag: Meso_0989
Name: glpX
Funciton: Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)
Meso_0989
glpX
Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)
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