Regulon of RhaR in Agrobacterium tumefaciens str. C58 (Cereon)

Properties
Regulator type:	Transcription factor
TF locus tag:	Atu3486
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Regulog:	RhaR - Rhizobiales
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - DeoR
By effector - Rhamnose
By pathway - Rhamnose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -158 Score: 6.4 Sequence: TCAATCA-(3)-ACGATCA Position: -117 Score: 5.6 Sequence: ATGAAAA-(3)-ATGATCG Position: -107 Score: 6.7 Sequence: ATGATCG-(3)-TTGATTG Locus tag: Atu3485 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: Atu3484 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
	Atu3485	rhaEW	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
	Atu3484	rhaI	L-rhamnose isomerase (EC 5.3.1.14)
Position: -111 Score: 6.4 Sequence: TCAATCA-(3)-ACGATCA Position: -60 Score: 6.7 Sequence: TTGATCG-(3)-TTGATTG Locus tag: Atu3486 Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family Locus tag: Atu3487 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: Atu3488 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: Atu3489 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: Atu3490 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: Atu3491 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: Atu3492 Name: rhaK Funciton: putative rhamnulokinase
	Atu3486	rhaR	Predicted transcriptional regulator for rhamnose utilization, DeoR family
	Atu3487	rhaF	L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
	Atu3488	rhaG	L-rhamnose ABC transporter, duplicated ATP-binding component
	Atu3489	rhaH	L-rhamnose ABC transporter, permease component 1
	Atu3490	rhaJ	L-rhamnose ABC transporter, permease component 2
	Atu3491	rhaM	L-rhamnose mutarotase
	Atu3492	rhaK	putative rhamnulokinase

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