Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of RhaR in Rhizobium etli CFN 42

Properties
Regulator type: Transcription factor
TF locus tag: RHE_PE00290
Regulator family: DeoR
Regulation mode: repressor
Biological process: Rhamnose utilization
Effector: Rhamnose
Regulog: RhaR - Rhizobiales
Statistics of regulated genes:
- Genes 9
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 39 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -152
Score: 6.4
Sequence: TCAATCA-(3)-ACGATCA
Position: -111
Score: 6.6
Sequence: ATAATCG-(3)-TTGATCG
Position: -101
Score: 6.6
Sequence: TTGATCG-(3)-TCGATTG
Locus tag: RHE_PE00291
Name: rhaEW
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: RHE_PE00292
Name: rhaI
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
rhaEW
Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
rhaI
L-rhamnose isomerase (EC 5.3.1.14)

Position: -115
Score: 6.4
Sequence: TCAATCG-(3)-ACGATCA
Position: -105
Score: 6.4
Sequence: ACGATCA-(3)-TCGATTA
Position: -64
Score: 6.7
Sequence: ATGATCG-(3)-ATGATTG
Locus tag: RHE_PE00290
Name: rhaR
Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family
Locus tag: RHE_PE00289
Name: rhaF
Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: RHE_PE00288
Name: rhaG
Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: RHE_PE00287
Name: rhaH
Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: RHE_PE00286
Name: rhaJ
Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: RHE_PE00285
Name: rhaM
Funciton: L-rhamnose mutarotase
Locus tag: RHE_PE00284
Name: rhaK
Funciton: putative rhamnulokinase
rhaR
Predicted transcriptional regulator for rhamnose utilization, DeoR family
rhaF
L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
rhaG
L-rhamnose ABC transporter, duplicated ATP-binding component
rhaH
L-rhamnose ABC transporter, permease component 1
rhaJ
L-rhamnose ABC transporter, permease component 2
rhaM
L-rhamnose mutarotase
rhaK
putative rhamnulokinase
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