Regulon of RhaR in Rhizobium etli CFN 42

Properties
Regulator type:	Transcription factor
TF locus tag:	RHE_PE00290
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Regulog:	RhaR - Rhizobiales
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - DeoR
By effector - Rhamnose
By pathway - Rhamnose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -152 Score: 6.4 Sequence: TCAATCA-(3)-ACGATCA Position: -111 Score: 6.6 Sequence: ATAATCG-(3)-TTGATCG Position: -101 Score: 6.6 Sequence: TTGATCG-(3)-TCGATTG Locus tag: RHE_PE00291 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: RHE_PE00292 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
	RHE_PE00291	rhaEW	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
	RHE_PE00292	rhaI	L-rhamnose isomerase (EC 5.3.1.14)
Position: -115 Score: 6.4 Sequence: TCAATCG-(3)-ACGATCA Position: -105 Score: 6.4 Sequence: ACGATCA-(3)-TCGATTA Position: -64 Score: 6.7 Sequence: ATGATCG-(3)-ATGATTG Locus tag: RHE_PE00290 Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family Locus tag: RHE_PE00289 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: RHE_PE00288 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: RHE_PE00287 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: RHE_PE00286 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: RHE_PE00285 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: RHE_PE00284 Name: rhaK Funciton: putative rhamnulokinase
	RHE_PE00290	rhaR	Predicted transcriptional regulator for rhamnose utilization, DeoR family
	RHE_PE00289	rhaF	L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
	RHE_PE00288	rhaG	L-rhamnose ABC transporter, duplicated ATP-binding component
	RHE_PE00287	rhaH	L-rhamnose ABC transporter, permease component 1
	RHE_PE00286	rhaJ	L-rhamnose ABC transporter, permease component 2
	RHE_PE00285	rhaM	L-rhamnose mutarotase
	RHE_PE00284	rhaK	putative rhamnulokinase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD