Regulon of RhaR in Rhizobium sp. NGR234

Properties
Regulator type:	Transcription factor
TF locus tag:	NGR_c02440
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Regulog:	RhaR - Rhizobiales
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - DeoR
By effector - Rhamnose
By pathway - Rhamnose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -156 Score: 6.4 Sequence: TCAATCA-(3)-TCGATCA Position: -115 Score: 5.7 Sequence: ATGAACG-(3)-CTGATCG Position: -105 Score: 6.1 Sequence: CTGATCG-(3)-TTGATTG Locus tag: NGR_c02430 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: NGR_c02420 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
	NGR_c02430	rhaEW	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
	NGR_c02420	rhaI	L-rhamnose isomerase (EC 5.3.1.14)
Position: -114 Score: 6.4 Sequence: TCAATCA-(3)-ACGATCA Position: -73 Score: 5.6 Sequence: ATGAAAA-(3)-ATGATCG Position: -63 Score: 6.1 Sequence: ATGATCG-(3)-CTGATTG Position: -53 Score: 5.3 Sequence: CTGATTG-(3)-ATGCTCG Locus tag: NGR_c02440 Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family Locus tag: NGR_c02450 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: NGR_c02460 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: NGR_c02470 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: NGR_c02480 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: NGR_c02490 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: NGR_c02500 Name: rhaK Funciton: putative rhamnulokinase
	NGR_c02440	rhaR	Predicted transcriptional regulator for rhamnose utilization, DeoR family
	NGR_c02450	rhaF	L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
	NGR_c02460	rhaG	L-rhamnose ABC transporter, duplicated ATP-binding component
	NGR_c02470	rhaH	L-rhamnose ABC transporter, permease component 1
	NGR_c02480	rhaJ	L-rhamnose ABC transporter, permease component 2
	NGR_c02490	rhaM	L-rhamnose mutarotase
	NGR_c02500	rhaK	putative rhamnulokinase

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