Regulon of RhaR in Sinorhizobium meliloti 1021

Properties
Regulator type:	Transcription factor
TF locus tag:	SMc02323
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Regulog:	RhaR - Rhizobiales
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - DeoR
By effector - Rhamnose
By pathway - Rhamnose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -155 Score: 6 Sequence: TCAATCA-(3)-TCAATCA Position: -114 Score: 6.3 Sequence: ATGAACG-(3)-TTGATCG Position: -104 Score: 6.7 Sequence: TTGATCG-(3)-TTGATTG Locus tag: SMc02322 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: SMc02321 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
	SMc02322	rhaEW	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
	SMc02321	rhaI	L-rhamnose isomerase (EC 5.3.1.14)
Position: -114 Score: 6.4 Sequence: TCAATCA-(3)-ACGATCA Position: -63 Score: 5.8 Sequence: ATGATTG-(3)-GTGATTG Position: -53 Score: 5.3 Sequence: GTGATTG-(3)-ATGCTCG Locus tag: SMc02323 Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family Locus tag: SMc02324 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: SMc02325 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: SMc03000 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: SMc03001 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: SMc03002 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: SMc03003 Name: rhaK Funciton: putative rhamnulokinase
	SMc02323	rhaR	Predicted transcriptional regulator for rhamnose utilization, DeoR family
	SMc02324	rhaF	L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
	SMc02325	rhaG	L-rhamnose ABC transporter, duplicated ATP-binding component
	SMc03000	rhaH	L-rhamnose ABC transporter, permease component 1
	SMc03001	rhaJ	L-rhamnose ABC transporter, permease component 2
	SMc03002	rhaM	L-rhamnose mutarotase
	SMc03003	rhaK	putative rhamnulokinase

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