Regulon of HTCS_Hep in Bacteroides stercoris ATCC 43183
| Regulator type: | Transcription factor |
| TF locus tag: | BACSTE_03701 |
| Regulator family: | [Other] |
| Regulation mode: | activator (repressor) |
| Biological process: | Heparin utilization |
| Effector: | Heparin |
| Regulog: | HTCS_Hep - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By effector - Heparin
- By pathway - Heparin utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -96
Score: 7.9 Sequence: ACAAATATAG-(11)-ACAAATAGGG
Locus tag: BACSTE_03699
Name: hepC Funciton: Heparin lyase I / Heparinase I (EC 4.2.2.7) |
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hepC
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Heparin lyase I / Heparinase I (EC 4.2.2.7)
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Position: -148
Score: 8.7 Sequence: ACAAATACGA-(11)-ACAAATTTAA
Locus tag: BACSTE_03702
Name: hepL1 Funciton: Heparinase III protein / Heparitin sulfate lyase (EC 4.2.2.8)
Locus tag: BACSTE_03703
Name: BT4661 Funciton: Hypothetical protein, presumably involved in heparin utilization
Locus tag: BACSTE_03704
Name: susC_Hep-1 Funciton: TonB-dependent outer membrane transporter of heparin oligosaccharides
Locus tag: BACSTE_03705
Name: susC_Hep-1 Funciton: TonB-dependent outer membrane transporter of heparin oligosaccharides
Locus tag: BACSTE_03706
Name: susD_Hep Funciton: Outer membrane polysaccharide binding protein for heparin oligosaccharides |
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hepL1
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Heparinase III protein / Heparitin sulfate lyase (EC 4.2.2.8)
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BT4661
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Hypothetical protein, presumably involved in heparin utilization
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susC_Hep-1
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TonB-dependent outer membrane transporter of heparin oligosaccharides
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susC_Hep-1
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TonB-dependent outer membrane transporter of heparin oligosaccharides
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susD_Hep
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Outer membrane polysaccharide binding protein for heparin oligosaccharides
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |