Regulon of TPP in Bifidobacterium adolescentis ATCC 15703
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Bifidobacteriaceae |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -135
Score: 55.8 Sequence: CAGGCGCAGACACGG...
Locus tag: BAD_0950
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BAD_0949
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BAD_0948
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoC
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Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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Position: -103
Score: 59.8 Sequence: TAAACATGCGGGGGT...
Locus tag: BAD_1144
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: BAD_1145
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: BAD_1146
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: BAD_1147
Name: COG0011 Funciton: Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative |
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiD
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Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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COG0011
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Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |