Regulon of TPP in Bifidobacterium angulatum DSM 20098

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Bifidobacteriaceae
Under regulation:
- Genes	11
- Operons	4

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -125 Score: 46.3 Sequence: GGCAATGACACGGGA... Locus tag: BIFANG_01019 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: BIFANG_01020 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: BIFANG_01021 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BIFANG_01019	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BIFANG_01020	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BIFANG_01021	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -265 Score: 37.5 Sequence: GCACAACCGAACGGG... Locus tag: BIFANG_00619 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: BIFANG_00618 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: BIFANG_00617 Name: thiG Funciton: Thiazole biosynthesis protein ThiG
	BIFANG_00619	thiS	Sulfur carrier protein ThiS
	BIFANG_00618	thiF	Sulfur carrier protein adenylyltransferase ThiF
	BIFANG_00617	thiG	Thiazole biosynthesis protein ThiG
Position: -118 Score: 56.2 Sequence: GCAAATTGCAGGGGA... Locus tag: BIFANG_01057 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
	BIFANG_01057	tenA	Thiaminase II (EC 3.5.99.2)
Position: -100 Score: 56.8 Sequence: TGTACATGCAGGGGG... Locus tag: BIFANG_01690 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: BIFANG_01691 Name: thiEC Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Thiamin biosynthesis protein ThiC Locus tag: BIFANG_01692 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: BIFANG_01693 Name: COG0011 Funciton: Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative
	BIFANG_01690	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	BIFANG_01691	thiEC	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Thiamin biosynthesis protein ThiC
	BIFANG_01692	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	BIFANG_01693	COG0011	Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD