Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of TPP in Bifidobacterium longum NCC2705

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Bifidobacteriaceae
Under regulation:
- Genes 10
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -279
Score: 47.6
Sequence: AACCGTAACGAACGG...
Locus tag: BL1055a
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: BL1055
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
thiS
Sulfur carrier protein ThiS
thiG
Thiazole biosynthesis protein ThiG

Position: -100
Score: 59.2
Sequence: CACTGTAATGCAGGG...
Locus tag: BL0115
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: BL0114
Name: thiEC
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Thiamin biosynthesis protein ThiC
Locus tag: BL0113
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: BL0112
Name: COG0011
Funciton: Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiEC
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Thiamin biosynthesis protein ThiC
thiD
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
COG0011
Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative

Position: -157
Score: 33.3
Sequence: AGGCGCATTGCAGGG...
Locus tag: BL0804
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
tenA
Thiaminase II (EC 3.5.99.2)

Position: -212
Score: 48
Sequence: GGGAGTTGACACGGG...
Locus tag: BL1071
Name: ykoE
Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BL1070
Name: ykoD
Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BL1069
Name: ykoC
Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoD
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoC
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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