Regulon of TPP in Bifidobacterium breve DSM 20213
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Bifidobacteriaceae |
| Under regulation: | |
| - Genes | 8 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -279
Score: 51.3 Sequence: CGTAACGAACGGGAG...
Locus tag: BIFBRE_00980
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: BIFBRE_00981
Name: thiG Funciton: Thiazole biosynthesis protein ThiG |
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thiS
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Sulfur carrier protein ThiS
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thiG
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Thiazole biosynthesis protein ThiG
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Position: -170
Score: 46.3 Sequence: GGAGTTGACACGGGA...
Locus tag: BIFBRE_00957
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BIFBRE_00958
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BIFBRE_00959
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoC
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Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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Position: -201
Score: 58.2 Sequence: CAACGTAATGCAGGG...
Locus tag: BIFBRE_00589
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: BIFBRE_00588
Name: thiEC Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Thiamin biosynthesis protein ThiC |
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiEC
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Thiamin biosynthesis protein ThiC
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Position: -156
Score: 38 Sequence: GCGCATTGCAGGGGA...
Locus tag: BIFBRE_01283
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
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tenA
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Thiaminase II (EC 3.5.99.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |