Regulon of TPP in Bifidobacterium breve DSM 20213

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Bifidobacteriaceae
Under regulation:
- Genes	8
- Operons	4

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -279 Score: 51.3 Sequence: CGTAACGAACGGGAG... Locus tag: BIFBRE_00980 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: BIFBRE_00981 Name: thiG Funciton: Thiazole biosynthesis protein ThiG
	BIFBRE_00980	thiS	Sulfur carrier protein ThiS
	BIFBRE_00981	thiG	Thiazole biosynthesis protein ThiG
Position: -170 Score: 46.3 Sequence: GGAGTTGACACGGGA... Locus tag: BIFBRE_00957 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: BIFBRE_00958 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: BIFBRE_00959 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BIFBRE_00957	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BIFBRE_00958	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BIFBRE_00959	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -201 Score: 58.2 Sequence: CAACGTAATGCAGGG... Locus tag: BIFBRE_00589 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: BIFBRE_00588 Name: thiEC Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Thiamin biosynthesis protein ThiC
	BIFBRE_00589	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	BIFBRE_00588	thiEC	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Thiamin biosynthesis protein ThiC
Position: -156 Score: 38 Sequence: GCGCATTGCAGGGGA... Locus tag: BIFBRE_01283 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
	BIFBRE_01283	tenA	Thiaminase II (EC 3.5.99.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD