Regulon of TPP in Bifidobacterium animalis subsp. lactis AD011
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Bifidobacteriaceae |
| Under regulation: | |
| - Genes | 10 |
| - Operons | 5 |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -88
Score: 45.9 Sequence: ACACATGTCAGGGGA...
Locus tag: BLA_0814
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: BLA_0815
Name: thiED Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: BLA_0816
Name: COG0011 Funciton: Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative |
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiED
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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COG0011
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Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative
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Position: -126
Score: 50.7 Sequence: GAACAGCGACACGGG...
Locus tag: BLA_1029
Name: thiP Funciton: Thiamin ABC transporter, permease protein
Locus tag: BLA_1028
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: BLA_1027
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component |
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thiP
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Thiamin ABC transporter, permease protein
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thiB
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Thiamin ABC transporter, substrate-binding component
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thiQ
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Thiamin ABC transporter, ATPase component
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Position: -89
Score: 55.7 Sequence: CGAAGATGCGGGGGG...
Locus tag: BLA_1213
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
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tenA
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Thiaminase II (EC 3.5.99.2)
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Position: -146
Score: 52.8 Sequence: GGCATCGACACGGGA...
Locus tag: BLA_1236
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BLA_1237
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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Position: -134
Score: 57.8 Sequence: TCGATGTAGACACGG...
Locus tag: BLA_1225
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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ykoE
|
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |