Regulon of TPP in Bifidobacterium animalis subsp. lactis AD011

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Bifidobacteriaceae
Under regulation:
- Genes	10
- Operons	5

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -88 Score: 45.9 Sequence: ACACATGTCAGGGGA... Locus tag: BLA_0814 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: BLA_0815 Name: thiED Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: BLA_0816 Name: COG0011 Funciton: Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative
	BLA_0814	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	BLA_0815	thiED	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	BLA_0816	COG0011	Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative
Position: -126 Score: 50.7 Sequence: GAACAGCGACACGGG... Locus tag: BLA_1029 Name: thiP Funciton: Thiamin ABC transporter, permease protein Locus tag: BLA_1028 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: BLA_1027 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component
	BLA_1029	thiP	Thiamin ABC transporter, permease protein
	BLA_1028	thiB	Thiamin ABC transporter, substrate-binding component
	BLA_1027	thiQ	Thiamin ABC transporter, ATPase component
Position: -89 Score: 55.7 Sequence: CGAAGATGCGGGGGG... Locus tag: BLA_1213 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
	BLA_1213	tenA	Thiaminase II (EC 3.5.99.2)
Position: -146 Score: 52.8 Sequence: GGCATCGACACGGGA... Locus tag: BLA_1236 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: BLA_1237 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BLA_1236	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BLA_1237	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -134 Score: 57.8 Sequence: TCGATGTAGACACGG... Locus tag: BLA_1225 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	BLA_1225	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD