Regulon of TPP in Ruminococcus gnavus ATCC 29149
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Clostridia-3 |
| Under regulation: | |
| - Genes | 6 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Clostridia-3
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -154
Score: 61.5 Sequence: TTGATAACAAGGGGA...
Locus tag: RUMGNA_01568
Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter |
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thiT
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Substrate-specific component ThiT of thiamin ECF transporter
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Position: -194
Score: 50.3 Sequence: AGAAACAAAAAAGGG...
Locus tag: RUMGNA_03567
Name: thiC Funciton: Thiamin biosynthesis protein ThiC |
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thiC
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Thiamin biosynthesis protein ThiC
|
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Position: -201
Score: 47.6 Sequence: AAATAAAAAACAAGG...
Locus tag: RUMGNA_01198
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: RUMGNA_01197
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: RUMGNA_01196
Name: PF00702 Funciton: Haloacid dehalogenase-like hydrolase
Locus tag: RUMGNA_01195
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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PF00702
|
Haloacid dehalogenase-like hydrolase
|
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |