Regulon of TPP in Delftia acidovorans SPH-1

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Comamonadaceae
Under regulation:
- Genes	11
- Operons	3

Member of regulog collections

By taxonomy - Comamonadaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -390 Score: 54.4 Sequence: GCTCTGCTCCGGGGT... Locus tag: Daci_2313 Name: thiC Funciton: Thiamin biosynthesis protein ThiC
	Daci_2313	thiC	Thiamin biosynthesis protein ThiC
Position: -79 Score: 23.4 Sequence: TGCCGCGCAGCGCCC... Locus tag: Daci_3293 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: Daci_3292 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: Daci_3291 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: Daci_3290 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	Daci_3293	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	Daci_3292	thiS	Sulfur carrier protein ThiS
	Daci_3291	thiG	Thiazole biosynthesis protein ThiG
	Daci_3290	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -160 Score: 45.7 Sequence: GCCCTCCGCTCCGGG... Locus tag: Daci_4530 Name: PF04443 Funciton: Acyl-protein synthetase, LuxE Locus tag: Daci_4529 Name: PF05893 Funciton: putative acyl-CoA reductase Locus tag: Daci_4528 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: Daci_4527 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component Locus tag: Daci_4526 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: Daci_4525 Name: oarX Funciton: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
	Daci_4530	PF04443	Acyl-protein synthetase, LuxE
	Daci_4529	PF05893	putative acyl-CoA reductase
	Daci_4528	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	Daci_4527	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component
	Daci_4526	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	Daci_4525	oarX	Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD