Regulon of TPP in Delftia acidovorans SPH-1
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Comamonadaceae |
| Under regulation: | |
| - Genes | 11 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -390
Score: 54.4 Sequence: GCTCTGCTCCGGGGT...
Locus tag: Daci_2313
Name: thiC Funciton: Thiamin biosynthesis protein ThiC |
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thiC
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Thiamin biosynthesis protein ThiC
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Position: -79
Score: 23.4 Sequence: TGCCGCGCAGCGCCC...
Locus tag: Daci_3293
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Daci_3292
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Daci_3291
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Daci_3290
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiO
|
Glycine oxidase ThiO (EC 1.4.3.19)
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thiS
|
Sulfur carrier protein ThiS
|
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thiG
|
Thiazole biosynthesis protein ThiG
|
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
|
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Position: -160
Score: 45.7 Sequence: GCCCTCCGCTCCGGG...
Locus tag: Daci_4530
Name: PF04443 Funciton: Acyl-protein synthetase, LuxE
Locus tag: Daci_4529
Name: PF05893 Funciton: putative acyl-CoA reductase
Locus tag: Daci_4528
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: Daci_4527
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Daci_4526
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Daci_4525
Name: oarX Funciton: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX |
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PF04443
|
Acyl-protein synthetase, LuxE
|
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PF05893
|
putative acyl-CoA reductase
|
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thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
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thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
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thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
|
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oarX
|
Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |