Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HTCS_Ara-1 in Bacteroides eggerthii DSM 20697

Properties
Regulator type: Transcription factor
TF locus tag: BACEGG_01541
Regulator family: [Other]
Regulation mode: activator
Biological process: Arabinan utilization
Effector: Arabinan
Regulog: HTCS_Ara-1 - Bacteroidaceae
Statistics of regulated genes:
- Genes 7
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -285
Score: 7.4
Sequence: TGTCCACCTTAAAAGGTCATATATCCACCT
Locus tag: BACEGG_01542
Name: abn2
Funciton: Arabinan endo-1,5-alpha-L-arabinosidase
Locus tag: BACEGG_01543
Name: abf2
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: BACEGG_01544
Name: GH43
Funciton: Hypothetical glycoside hydrolase, family 43, similar to arabinosidase
abn2
Arabinan endo-1,5-alpha-L-arabinosidase
abf2
Alpha-N-arabinofuranosidase (EC 3.2.1.55)
GH43
Hypothetical glycoside hydrolase, family 43, similar to arabinosidase

Position: -349
Score: 6.4
Sequence: TCTCTACACTTAAAATTCGTTTATCCACCT
Position: -328
Score: 7.3
Sequence: TATCCACCTCTAAAACCCATTTGTCCACCC
Locus tag: BACEGG_01540
Name: susC_Ara-3
Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharides
Locus tag: BACEGG_01539
Name: susD_Ara-3
Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BACEGG_01538
Name: null
Funciton: hypothetical protein
Locus tag: BACEGG_01537
Name: abn3
Funciton: Arabinan endo-1,5-alpha-L-arabinosidase
susC_Ara-3
TonB-dependent outer membrane transporter of arabinan oligosaccharides
susD_Ara-3
Outer membrane polysaccharide binding protein for arabinan oligosaccharides
hypothetical protein
abn3
Arabinan endo-1,5-alpha-L-arabinosidase
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD