Regulon of LexA in Clostridium hiranonis DSM 13275
| Regulator type: | Transcription factor |
| TF locus tag: | CLOHIR_00530 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Clostridia-2 |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-2
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -79
Score: 4.9 Sequence: TAGTACATATGTTTGA
Locus tag: CLOHIR_00903
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: CLOHIR_00904
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: CLOHIR_00905
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -41
Score: 5.2 Sequence: TAGAACAAATGTTTGA
Locus tag: CLOHIR_01234
Name: recA Funciton: Recombination protein A |
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recA
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Recombination protein A
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Position: -83
Score: 5.1 Sequence: ACGAACTTATGTTTGA
Locus tag: CLOHIR_00026
Name: recD Funciton: RecD-like DNA helicase YrrC
Locus tag: CLOHIR_00027
Name: comF Funciton: ComF operon protein C |
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recD
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RecD-like DNA helicase YrrC
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comF
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ComF operon protein C
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Position: -165
Score: 4.9 Sequence: ACGAATAAATGTTTGT
Locus tag: CLOHIR_00530
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |