Regulon of HrcA in Ruminococcus gnavus ATCC 29149

Properties
Regulator type:	Transcription factor
TF locus tag:	RUMGNA_00418
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Regulog:	HrcA - Clostridia-3
Statistics of regulated genes:
- Genes	11
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 81 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - HrcA
By TF family - HrcA
By effector - Heat shock
By pathway - Heat shock response

Regulated operons
	Locus Tag	Name	Function
Position: -83 Score: 5.6 Sequence: TTAGCACTCTTCTCTTGACGTGGCTAA Locus tag: RUMGNA_00181 Name: clpB Funciton: ATP-dependent Clp protease ATP-binding subunit ClpB
	RUMGNA_00181	clpB	ATP-dependent Clp protease ATP-binding subunit ClpB
Position: -150 Score: 6.8 Sequence: TTAGCACTCACCACTTGACAGTGCCAA Locus tag: RUMGNA_00923 Name: hsp20 Funciton: Heat shock protein Hsp20 Locus tag: RUMGNA_00924 Name: dnaJ2 Funciton: Chaperone protein DnaJ
	RUMGNA_00923	hsp20	Heat shock protein Hsp20
	RUMGNA_00924	dnaJ2	Chaperone protein DnaJ
Position: -395 Score: 7.1 Sequence: TTAGCACTCGATATGAACGAGTGCTAA Locus tag: RUMGNA_02097 Name: groEL Funciton: Heat shock protein 60 family chaperone GroEL
	RUMGNA_02097	groEL	Heat shock protein 60 family chaperone GroEL
Position: -54 Score: 7.1 Sequence: TTAGCACTCGATATGAACGAGTGCTAA Locus tag: RUMGNA_02096 Name: groES Funciton: Heat shock protein 60 family co-chaperone GroES
	RUMGNA_02096	groES	Heat shock protein 60 family co-chaperone GroES
Position: -34 Score: 7.4 Sequence: TTAGCACTCAACTGAAAAGAGTGCTAA Locus tag: RUMGNA_00155 Name: htpG Funciton: Heat shock chaperone protein 90
	RUMGNA_00155	htpG	Heat shock chaperone protein 90
Position: -20 Score: 7.3 Sequence: TTAGCACTCAAAACAAAGGAGTGCTAA Locus tag: RUMGNA_00418 Name: hrcA Funciton: heat-inducible transcription repressor HrcA Locus tag: RUMGNA_00417 Name: null Funciton: hypothetical protein Locus tag: RUMGNA_00416 Name: grpE Funciton: Heat shock protein GrpE Locus tag: RUMGNA_00415 Name: dnaK Funciton: Chaperone protein DnaK Locus tag: RUMGNA_00414 Name: dnaJ Funciton: Chaperone protein DnaJ
	RUMGNA_00418	hrcA	heat-inducible transcription repressor HrcA
	RUMGNA_00417		hypothetical protein
	RUMGNA_00416	grpE	Heat shock protein GrpE
	RUMGNA_00415	dnaK	Chaperone protein DnaK
	RUMGNA_00414	dnaJ	Chaperone protein DnaJ

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD