Regulon of HrcA in Clostridium scindens ATCC 35704
| Regulator type: | Transcription factor |
| TF locus tag: | CLOSCI_01188 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -100
Score: 7.3 Sequence: TTAGCACTCAATACTTGACAGTGCTAA
Locus tag: CLOSCI_04021
Name: hsp20 Funciton: Heat shock protein Hsp20 |
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hsp20
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Heat shock protein Hsp20
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Position: -94
Score: 7.2 Sequence: TTAGCACTCACCTCTTGACAGTGCTAA
Locus tag: CLOSCI_02798
Name: clpB Funciton: ATP-dependent Clp protease ATP-binding subunit ClpB |
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clpB
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ATP-dependent Clp protease ATP-binding subunit ClpB
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Position: -397
Score: 7.5 Sequence: TTAGCACTCTCTTTTTATGAGTGCTAA
Locus tag: CLOSCI_00050
Name: groEL Funciton: Heat shock protein 60 family chaperone GroEL |
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groEL
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Heat shock protein 60 family chaperone GroEL
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Position: -58
Score: 7.5 Sequence: TTAGCACTCTCTTTTTATGAGTGCTAA
Locus tag: CLOSCI_00049
Name: groES Funciton: Heat shock protein 60 family co-chaperone GroES |
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groES
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Heat shock protein 60 family co-chaperone GroES
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Position: -97
Score: 7.2 Sequence: TTAGCACTCATCTATTGACAGTGCTAA
Locus tag: CLOSCI_02851
Name: hsp20 Funciton: Heat shock protein Hsp20 |
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hsp20
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Heat shock protein Hsp20
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Position: -54
Score: 7.3 Sequence: TTAGCACTCGAAAATGTAGAGTGCTAA
Locus tag: CLOSCI_01188
Name: hrcA Funciton: heat-inducible transcription repressor HrcA
Locus tag: CLOSCI_01189
Name: grpE Funciton: Heat shock protein GrpE
Locus tag: CLOSCI_01190
Name: dnaK Funciton: Chaperone protein DnaK
Locus tag: CLOSCI_01191
Name: dnaJ Funciton: Chaperone protein DnaJ |
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hrcA
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heat-inducible transcription repressor HrcA
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grpE
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Heat shock protein GrpE
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dnaK
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Chaperone protein DnaK
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dnaJ
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Chaperone protein DnaJ
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |