Regulon of HrcA in Clostridium nexile DSM 1787
| Regulator type: | Transcription factor |
| TF locus tag: | CLONEX_00289 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -89
Score: 7.1 Sequence: TTAGCACTCACCCCTTGACAGTGCTAA
Locus tag: CLONEX_03685
Name: clpB Funciton: ATP-dependent Clp protease ATP-binding subunit ClpB |
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clpB
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ATP-dependent Clp protease ATP-binding subunit ClpB
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Position: -92
Score: 7.5 Sequence: TTAGCACTCACTTTAAAAGAGTGCTAA
Locus tag: CLONEX_03837
Name: htpG Funciton: Heat shock chaperone protein 90 |
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htpG
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Heat shock chaperone protein 90
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Position: -375
Score: 7 Sequence: TTAGCACTCGGACAAAGTGAGTGCTAA
Locus tag: CLONEX_00414
Name: groEL Funciton: Heat shock protein 60 family chaperone GroEL |
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groEL
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Heat shock protein 60 family chaperone GroEL
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Position: -63
Score: 7 Sequence: TTAGCACTCGGACAAAGTGAGTGCTAA
Locus tag: CLONEX_00415
Name: groES Funciton: Heat shock protein 60 family co-chaperone GroES |
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groES
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Heat shock protein 60 family co-chaperone GroES
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Position: -136
Score: 7.2 Sequence: TTAGCACTCACCTCTTGACAGTGCTAA
Locus tag: CLONEX_03691
Name: hsp20 Funciton: Heat shock protein Hsp20
Locus tag: CLONEX_03690
Name: dnaJ2 Funciton: Chaperone protein DnaJ |
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hsp20
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Heat shock protein Hsp20
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dnaJ2
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Chaperone protein DnaJ
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Position: -54
Score: 7.3 Sequence: TTAGCACTCGAAAGAATAGAGTGCTAA
Locus tag: CLONEX_00290
Name: hrcA Funciton: heat-inducible transcription repressor HrcA |
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hrcA
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heat-inducible transcription repressor HrcA
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |