Regulon of LexA in Ruminococcus gnavus ATCC 29149
| Regulator type: | Transcription factor |
| TF locus tag: | RUMGNA_01924 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
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Position: -83
Score: 5.1 Sequence: CCAAACAAATGTTTGA
Locus tag: RUMGNA_01924
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -37
Score: 4.8 Sequence: GCGAACAACTGTTCGG
Locus tag: RUMGNA_01745
Name: recA Funciton: Recombination protein A
Locus tag: RUMGNA_01746
Name: recX Funciton: regulatory protein RecX |
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recA
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Recombination protein A
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recX
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regulatory protein RecX
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Position: -75
Score: 4.5 Sequence: GCAAACATACTTTCGA
Locus tag: RUMGNA_00081
Name: umuC Funciton: DNA polymerase V involved in DNA-repair
Locus tag: RUMGNA_00080
Name: BACPEC_01776 Funciton: hypothetical protein |
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umuC
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DNA polymerase V involved in DNA-repair
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BACPEC_01776
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hypothetical protein
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Position: -62
Score: 5 Sequence: GCAAACATATGTTCTG
Position: -30
Score: 5.2 Sequence: AAGAACATATGTTCTG
Locus tag: RUMGNA_00361
Name: COG4277 Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: RUMGNA_00360
Name: BACPEC_02112 Funciton: Uracil-DNA glycosylase, family 1 |
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COG4277
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Predicted DNA-binding protein with the Helix-hairpin-helix motif
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BACPEC_02112
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Uracil-DNA glycosylase, family 1
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Position: -89
Score: 5 Sequence: ACAAACATACGTTCTG
Position: -51
Score: 5.1 Sequence: AAGAACGTATGTTCTT
Locus tag: RUMGNA_01921
Name: PF01476 Funciton: Peptidoglycan-binding lysin domain |
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PF01476
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Peptidoglycan-binding lysin domain
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |