Regulon of LexA in Ruminococcus gnavus ATCC 29149

Properties
Regulator type:	Transcription factor
TF locus tag:	RUMGNA_01924
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Clostridia-3
Statistics of regulated genes:
- Genes	8
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 102 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -83 Score: 5.1 Sequence: CCAAACAAATGTTTGA Locus tag: RUMGNA_01924 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	RUMGNA_01924	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -37 Score: 4.8 Sequence: GCGAACAACTGTTCGG Locus tag: RUMGNA_01745 Name: recA Funciton: Recombination protein A Locus tag: RUMGNA_01746 Name: recX Funciton: regulatory protein RecX
	RUMGNA_01745	recA	Recombination protein A
	RUMGNA_01746	recX	regulatory protein RecX
Position: -75 Score: 4.5 Sequence: GCAAACATACTTTCGA Locus tag: RUMGNA_00081 Name: umuC Funciton: DNA polymerase V involved in DNA-repair Locus tag: RUMGNA_00080 Name: BACPEC_01776 Funciton: hypothetical protein
	RUMGNA_00081	umuC	DNA polymerase V involved in DNA-repair
	RUMGNA_00080	BACPEC_01776	hypothetical protein
Position: -62 Score: 5 Sequence: GCAAACATATGTTCTG Position: -30 Score: 5.2 Sequence: AAGAACATATGTTCTG Locus tag: RUMGNA_00361 Name: COG4277 Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif Locus tag: RUMGNA_00360 Name: BACPEC_02112 Funciton: Uracil-DNA glycosylase, family 1
	RUMGNA_00361	COG4277	Predicted DNA-binding protein with the Helix-hairpin-helix motif
	RUMGNA_00360	BACPEC_02112	Uracil-DNA glycosylase, family 1
Position: -89 Score: 5 Sequence: ACAAACATACGTTCTG Position: -51 Score: 5.1 Sequence: AAGAACGTATGTTCTT Locus tag: RUMGNA_01921 Name: PF01476 Funciton: Peptidoglycan-binding lysin domain
	RUMGNA_01921	PF01476	Peptidoglycan-binding lysin domain

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD