Regulon of LexA in Dorea formicigenerans ATCC 27755
| Regulator type: | Transcription factor |
| TF locus tag: | DORFOR_01560 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -287
Score: 5.2 Sequence: TCGAACTTTTGTTCGT
Position: -259
Score: 4.8 Sequence: TCGAACAGTTGTTTGG
Position: -219
Score: 4.9 Sequence: CCGAACATATTTTCTA
Locus tag: DORFOR_01560
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -38
Score: 5.1 Sequence: CCGAACATTCGTTCGG
Locus tag: DORFOR_01417
Name: recA Funciton: Recombination protein A
Locus tag: DORFOR_01418
Name: recX Funciton: regulatory protein RecX |
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recA
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Recombination protein A
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recX
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regulatory protein RecX
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Position: -71
Score: 5.3 Sequence: TCGAACAAATGTTCTT
Position: -45
Score: 4.6 Sequence: CAGAACAGATGTTTGC
Locus tag: DORFOR_00795
Name: COG4277 Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: DORFOR_00794
Name: BACPEC_02112 Funciton: Uracil-DNA glycosylase, family 1 |
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COG4277
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Predicted DNA-binding protein with the Helix-hairpin-helix motif
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BACPEC_02112
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Uracil-DNA glycosylase, family 1
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Position: -168
Score: 4.9 Sequence: TAGAAAATATGTTCGG
Position: -128
Score: 4.8 Sequence: CCAAACAACTGTTCGA
Position: -100
Score: 5.2 Sequence: ACGAACAAAAGTTCGA
Locus tag: DORFOR_01559
Name: DORFOR_01559 Funciton: hypothetical protein |
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DORFOR_01559
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hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |