Regulon of LexA in Clostridium nexile DSM 1787

Properties
Regulator type:	Transcription factor
TF locus tag:	CLONEX_01664
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Clostridia-3
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 102 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -19 Score: 5.2 Sequence: ACGAACATAAGTTCGC Locus tag: CLONEX_03018 Name: recA Funciton: Recombination protein A Locus tag: CLONEX_03017 Name: recX Funciton: regulatory protein RecX
	CLONEX_03018	recA	Recombination protein A
	CLONEX_03017	recX	regulatory protein RecX
Position: -163 Score: 4.9 Sequence: CCGAACAACTGTTCTT Position: -130 Score: 5.2 Sequence: AAGAACAAATGTTTGT Position: -94 Score: 5 Sequence: ACGAACATATTTTCTA Locus tag: CLONEX_01664 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	CLONEX_01664	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -67 Score: 4.6 Sequence: GCAAACATCTGTTCTG Locus tag: CLONEX_00280 Name: COG4277 Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif Locus tag: CLONEX_00279 Name: BACPEC_02112 Funciton: Uracil-DNA glycosylase, family 1
	CLONEX_00280	COG4277	Predicted DNA-binding protein with the Helix-hairpin-helix motif
	CLONEX_00279	BACPEC_02112	Uracil-DNA glycosylase, family 1
Position: -126 Score: 5 Sequence: TAGAAAATATGTTCGT Position: -90 Score: 5.2 Sequence: ACAAACATTTGTTCTT Position: -57 Score: 4.9 Sequence: AAGAACAGTTGTTCGG Locus tag: CLONEX_01663 Name: PF01476 Funciton: Peptidoglycan-binding lysin domain
	CLONEX_01663	PF01476	Peptidoglycan-binding lysin domain

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD