Regulon of LexA in Clostridium bolteae ATCC BAA-613
| Regulator type: | Transcription factor |
| TF locus tag: | CLOBOL_03828 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 7 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -46
Score: 4.5 Sequence: CAGAACGTCTGTTCTT
Position: -8
Score: 5.1 Sequence: CAGAACAAATGTTTGT
Locus tag: CLOBOL_03828
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
|||
|
lexA
|
SOS-response repressor and protease LexA (EC 3.4.21.88)
|
||
|
Position: -8
Score: 5.2 Sequence: AAGAACAAATGTTCTT
Position: 50
Score: 4.7 Sequence: GCAAACATACGTTCTG
Locus tag: CLOBOL_04661
Name: COG4277 Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif
Locus tag: CLOBOL_04660
Name: BACPEC_02112 Funciton: Uracil-DNA glycosylase, family 1 |
|||
|
COG4277
|
Predicted DNA-binding protein with the Helix-hairpin-helix motif
|
||
|
BACPEC_02112
|
Uracil-DNA glycosylase, family 1
|
||
|
Position: -8
Score: 4.9 Sequence: GAGAACATTTGTTCGC
Locus tag: CLOBOL_02320
Name: recA Funciton: Recombination protein A
Locus tag: CLOBOL_02319
Name: recX Funciton: regulatory protein RecX |
|||
|
recA
|
Recombination protein A
|
||
|
recX
|
regulatory protein RecX
|
||
|
Position: -122
Score: 5.3 Sequence: AAGAACAAATGTTCGA
Locus tag: CLOBOL_00438
Name: umuC Funciton: DNA polymerase V involved in DNA-repair
Locus tag: CLOBOL_00437
Name: BACPEC_01776 Funciton: hypothetical protein |
|||
|
umuC
|
DNA polymerase V involved in DNA-repair
|
||
|
BACPEC_01776
|
hypothetical protein
|
||
|
Position: -160
Score: 5.1 Sequence: ACAAACATTTGTTCTG
Position: -122
Score: 4.5 Sequence: AAGAACAGACGTTCTG
Locus tag: CLOBOL_03827
Name: PF01476 Funciton: Peptidoglycan-binding lysin domain |
|||
|
PF01476
|
Peptidoglycan-binding lysin domain
|
||
|
Position: -8
Score: 5.1 Sequence: ACAAACAAATGTTCTG
Locus tag: CLOBOL_06773
Name: GNAT Funciton: GCN5-related N-acetyltransferase
Locus tag: CLOBOL_06771
Name: COG4422 Funciton: Bacteriophage protein gp37 |
|||
|
GNAT
|
GCN5-related N-acetyltransferase
|
||
|
COG4422
|
Bacteriophage protein gp37
|
||
|
Position: -34
Score: 5.1 Sequence: TAGAACATATGTTCTG
Locus tag: CLOBOL_04045
Name: PS51257 Funciton: hypothetical protein
Locus tag: CLOBOL_04044
Name: unuC2 Funciton: DNA polymerase V involved in DNA-repair |
|||
|
PS51257
|
hypothetical protein
|
||
|
unuC2
|
DNA polymerase V involved in DNA-repair
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |