Regulon of LexA in Bryantella formatexigens DSM 14469

Properties
Regulator type:	Transcription factor
TF locus tag:	BRYFOR_04022
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Clostridia-3
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 102 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -31 Score: 5.5 Sequence: ACGAACATAAGTTCGT Locus tag: BRYFOR_02052 Name: recA Funciton: Recombination protein A Locus tag: BRYFOR_02053 Name: recX Funciton: regulatory protein RecX
	BRYFOR_02052	recA	Recombination protein A
	BRYFOR_02053	recX	regulatory protein RecX
Position: -48 Score: 5.1 Sequence: TCGAACGAATGTTCTT Locus tag: BRYFOR_02062 Name: umuC Funciton: DNA polymerase V involved in DNA-repair Locus tag: BRYFOR_02063 Name: BACPEC_01776 Funciton: hypothetical protein
	BRYFOR_02062	umuC	DNA polymerase V involved in DNA-repair
	BRYFOR_02063	BACPEC_01776	hypothetical protein
Position: -123 Score: 5.1 Sequence: TCGAACATAAGTTCTA Position: -98 Score: 4.9 Sequence: CAGAACTTATGTTCTT Locus tag: BRYFOR_02389 Name: COG4277 Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif Locus tag: BRYFOR_02390 Name: BACPEC_02112 Funciton: Uracil-DNA glycosylase, family 1
	BRYFOR_02389	COG4277	Predicted DNA-binding protein with the Helix-hairpin-helix motif
	BRYFOR_02390	BACPEC_02112	Uracil-DNA glycosylase, family 1
Position: -186 Score: 5 Sequence: TCGAAAATTTGTTCGA Position: -160 Score: 4.8 Sequence: ACAAACATCTGTTCTG Locus tag: BRYFOR_04038 Name: PF01476 Funciton: Peptidoglycan-binding lysin domain
	BRYFOR_04038	PF01476	Peptidoglycan-binding lysin domain

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD