Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Clostridium hiranonis DSM 13275

Properties
Regulator type: Transcription factor
TF locus tag: CLOHIR_01937
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbon catabolism; Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Regulog: CcpA - Clostridia-2
Statistics of regulated genes:
- Genes 22
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 113 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: 18
Score: 4
Sequence: AAGAAAAAAATTGGCT
Locus tag: CLOHIR_01036
Name: CD2693
Funciton: putative sodium:dicarboxylate symporter
CLOHIR_01036
CD2693
putative sodium:dicarboxylate symporter
Position: -163
Score: 4.4
Sequence: GATATATCGTTTTCTT
Locus tag: CLOHIR_00836
Name: cggR
Funciton: Central glycolytic genes regulator
CLOHIR_00836
cggR
Central glycolytic genes regulator
Position: -97
Score: 4.3
Sequence: CGGAAAACATTTACAA
Locus tag: CLOHIR_00162
Name: trxB3
Funciton: Thioredoxin reductase (EC 1.8.1.9)
CLOHIR_00162
trxB3
Thioredoxin reductase (EC 1.8.1.9)
Position: 47
Score: 4.2
Sequence: AAAAGAAAGTTTTCCT
Position: 116
Score: 4.3
Sequence: TAGAAAATATATTCAT
Locus tag: CLOHIR_00161
Name: grdX
Funciton: GrdX protein
CLOHIR_00161
grdX
GrdX protein
Position: -141
Score: 4.3
Sequence: GAGAATAAGTTATCAA
Locus tag: CLOHIR_00956
Name: CD2791
Funciton: cell surface protein (putative S-layer protein precursor)
CLOHIR_00956
CD2791
cell surface protein (putative S-layer protein precursor)
Position: -159
Score: 4.9
Sequence: GAAAAAACGATTTCTT
Position: -11
Score: 4.1
Sequence: AGAAAAATATTATGAT
Locus tag: CLOHIR_01209
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
CLOHIR_01209
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -112
Score: 4.8
Sequence: AAGAAAATGTTTGCAA
Locus tag: CLOHIR_01724
Name: fba
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
CLOHIR_01724
fba
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -218
Score: 4
Sequence: AATAAAAAGTTATTCT
Locus tag: CLOHIR_00712
Name: sigF
Funciton: RNA polymerase sporulation specific sigma factor SigF
CLOHIR_00712
sigF
RNA polymerase sporulation specific sigma factor SigF
Position: -31
Score: 4.3
Sequence: AAATAAACATTTTCAT
Locus tag: CLOHIR_02123
Name: CD3664
Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
CLOHIR_02123
CD3664
Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Position: -153
Score: 4.7
Sequence: AAAAAAACATTTTCCT
Locus tag: CLOHIR_00174
Name: gatA
Funciton: PTS system, galactitol-specific IIA component (EC 2.7.1.69)
Locus tag: CLOHIR_00175
Name: gatB
Funciton: PTS system, galactitol-specific IIB component (EC 2.7.1.69)
Locus tag: CLOHIR_00176
Name: gatC
Funciton: PTS system, galactitol-specific IIC component (EC 2.7.1.69)
Locus tag: CLOHIR_00177
Name: gatD2
Funciton: Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
CLOHIR_00174
gatA
PTS system, galactitol-specific IIA component (EC 2.7.1.69)
CLOHIR_00175
gatB
PTS system, galactitol-specific IIB component (EC 2.7.1.69)
CLOHIR_00176
gatC
PTS system, galactitol-specific IIC component (EC 2.7.1.69)
CLOHIR_00177
gatD2
Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
Position: -77
Score: 4.3
Sequence: AGGAAAACGTTAATTA
Locus tag: CLOHIR_00196
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: CLOHIR_00197
Name: nanP
Funciton: Predicted sialic acid transporter
CLOHIR_00196
nanA
N-acetylneuraminate lyase (EC 4.1.3.3)
CLOHIR_00197
nanP
Predicted sialic acid transporter
Position: 232
Score: 4.9
Sequence: AGGAAAACGATTTCGT
Locus tag: CLOHIR_01291
Name: aspB
Funciton: Pyridine nucleotide-disulphide oxidoreductase family protein
CLOHIR_01291
aspB
Pyridine nucleotide-disulphide oxidoreductase family protein
Position: -190
Score: 3.6
Sequence: TAGAAACATATATCTT
Locus tag: CLOHIR_01952
Name: rnfC
Funciton: Electron transport complex protein RnfC
Locus tag: CLOHIR_01953
Name: rnfD
Funciton: Electron transport complex protein RnfD
Locus tag: CLOHIR_01954
Name: rnfG
Funciton: Electron transport complex protein RnfG
Locus tag: CLOHIR_01955
Name: rnfE
Funciton: Electron transport complex protein RnfE
Locus tag: CLOHIR_01956
Name: rnfA
Funciton: Electron transport complex protein RnfA
Locus tag: CLOHIR_01957
Name: rnfB
Funciton: Electron transport complex protein RnfB
CLOHIR_01952
rnfC
Electron transport complex protein RnfC
CLOHIR_01953
rnfD
Electron transport complex protein RnfD
CLOHIR_01954
rnfG
Electron transport complex protein RnfG
CLOHIR_01955
rnfE
Electron transport complex protein RnfE
CLOHIR_01956
rnfA
Electron transport complex protein RnfA
CLOHIR_01957
rnfB
Electron transport complex protein RnfB
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