Regulon of TPP in Roseobacter sp. MED193
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Rhodobacterales |
| Under regulation: | |
| - Genes | 10 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -128
Score: 67 Sequence: GAGATACCTCGGGGT...
Locus tag: MED193_14432
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: MED193_14437
Name: thiP Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: MED193_14442
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ |
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thiB
|
Thiamin ABC transporter, substrate-binding component
|
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thiP
|
Thiamin ABC transporter, transmembrane component
|
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thiQ
|
Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
|
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Position: -246
Score: 49.9 Sequence: TAGCCTACGCAGGGG...
Locus tag: MED193_07728
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: MED193_07733
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: MED193_07738
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: MED193_07743
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: MED193_07748
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: MED193_07753
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: MED193_07758
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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thiC
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Thiamin biosynthesis protein ThiC
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thiO
|
Glycine oxidase ThiO (EC 1.4.3.19)
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thiS
|
Sulfur carrier protein ThiS
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thiG
|
Thiazole biosynthesis protein ThiG
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiF
|
Thiamine biosynthesis protein ThiF
|
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |