Regulon of TPP in Silicibacter TM1040
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Rhodobacterales |
| Under regulation: | |
| - Genes | 14 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -158
Score: 73.3 Sequence: TCGCCCCACCTCGGG...
Locus tag: TM1040_2818
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: TM1040_2817
Name: thiP Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: TM1040_2816
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ |
|||
|
thiB
|
Thiamin ABC transporter, substrate-binding component
|
||
|
thiP
|
Thiamin ABC transporter, transmembrane component
|
||
|
thiQ
|
Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
|
||
|
Position: -242
Score: 48.2 Sequence: GCAGCACGCAGGGGA...
Locus tag: TM1040_2054
Name: thiC Funciton: Thiamin biosynthesis protein ThiC |
|||
|
thiC
|
Thiamin biosynthesis protein ThiC
|
||
|
Position: -146
Score: 79.4 Sequence: GCGAACCGTTGGGGT...
Locus tag: TM1040_3649
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: TM1040_3650
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: TM1040_3651
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: TM1040_3652
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: TM1040_3653
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: TM1040_3654
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: TM1040_3655
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: TM1040_3656
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: TM1040_3657
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: TM1040_3658
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
|||
|
thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
|
||
|
thiO
|
Glycine oxidase ThiO (EC 1.4.3.19)
|
||
|
thiS
|
Sulfur carrier protein ThiS
|
||
|
thiG
|
Thiazole biosynthesis protein ThiG
|
||
|
thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
|
||
|
thiF
|
Thiamine biosynthesis protein ThiF
|
||
|
thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
|
||
|
tenA
|
Thiaminase II (EC 3.5.99.2)
|
||
|
thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
|
||
|
thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |