Regulon of TPP in Silicibacter TM1040

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Rhodobacterales
Under regulation:
- Genes	14
- Operons	3

Member of regulog collections

By taxonomy - Rhodobacterales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -158 Score: 73.3 Sequence: TCGCCCCACCTCGGG... Locus tag: TM1040_2818 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: TM1040_2817 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: TM1040_2816 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
	TM1040_2818	thiB	Thiamin ABC transporter, substrate-binding component
	TM1040_2817	thiP	Thiamin ABC transporter, transmembrane component
	TM1040_2816	thiQ	Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
Position: -242 Score: 48.2 Sequence: GCAGCACGCAGGGGA... Locus tag: TM1040_2054 Name: thiC Funciton: Thiamin biosynthesis protein ThiC
	TM1040_2054	thiC	Thiamin biosynthesis protein ThiC
Position: -146 Score: 79.4 Sequence: GCGAACCGTTGGGGT... Locus tag: TM1040_3649 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: TM1040_3650 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: TM1040_3651 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: TM1040_3652 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: TM1040_3653 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: TM1040_3654 Name: thiF Funciton: Thiamine biosynthesis protein ThiF Locus tag: TM1040_3655 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: TM1040_3656 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: TM1040_3657 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: TM1040_3658 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
	TM1040_3649	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	TM1040_3650	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	TM1040_3651	thiS	Sulfur carrier protein ThiS
	TM1040_3652	thiG	Thiazole biosynthesis protein ThiG
	TM1040_3653	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	TM1040_3654	thiF	Thiamine biosynthesis protein ThiF
	TM1040_3655	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	TM1040_3656	tenA	Thiaminase II (EC 3.5.99.2)
	TM1040_3657	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	TM1040_3658	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD