Regulon of TPP in Roseovarius nubinhibens ISM

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Rhodobacterales
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Rhodobacterales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -150 Score: 56 Sequence: TGGAGACCTCGGGGT... Locus tag: ISM_10586 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: ISM_10591 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: ISM_10596 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
	ISM_10586	thiB	Thiamin ABC transporter, substrate-binding component
	ISM_10591	thiP	Thiamin ABC transporter, transmembrane component
	ISM_10596	thiQ	Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
Position: -223 Score: 52.2 Sequence: ATTGCACGCAGGGGG... Locus tag: ISM_10621 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: ISM_10626 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: ISM_10631 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: ISM_10636 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: ISM_10641 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: ISM_10646 Name: thiF Funciton: Thiamine biosynthesis protein ThiF Locus tag: ISM_10651 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	ISM_10621	thiC	Thiamin biosynthesis protein ThiC
	ISM_10626	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	ISM_10631	thiS	Sulfur carrier protein ThiS
	ISM_10636	thiG	Thiazole biosynthesis protein ThiG
	ISM_10641	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	ISM_10646	thiF	Thiamine biosynthesis protein ThiF
	ISM_10651	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD