Regulon of TPP in Oceanicola batsensis HTCC2597
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Rhodobacterales |
| Under regulation: | |
| - Genes | 18 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -152
Score: 63.7 Sequence: GCCCCTCACCTAGGG...
Locus tag: OB2597_18032
Name: PF00293 Funciton: ADP-ribose pyrophosphatase (EC 3.6.1.13)
Locus tag: OB2597_18027
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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PF00293
|
ADP-ribose pyrophosphatase (EC 3.6.1.13)
|
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
|
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Position: -147
Score: 63.7 Sequence: GCGCCACCTCGGGGT...
Locus tag: OB2597_14229
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: OB2597_14234
Name: thiP Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: OB2597_14239
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ |
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thiB
|
Thiamin ABC transporter, substrate-binding component
|
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thiP
|
Thiamin ABC transporter, transmembrane component
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thiQ
|
Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
|
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Position: -172
Score: 70.8 Sequence: GCAGAATCCGTTGGG...
Locus tag: OB2597_02767
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: OB2597_02762
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: OB2597_02757
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: OB2597_02752
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: OB2597_02747
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: OB2597_02742
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: OB2597_02737
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: OB2597_02732
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: OB2597_02727
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: OB2597_02722
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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thiO
|
Glycine oxidase ThiO (EC 1.4.3.19)
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thiS
|
Sulfur carrier protein ThiS
|
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thiG
|
Thiazole biosynthesis protein ThiG
|
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiF
|
Thiamine biosynthesis protein ThiF
|
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thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
|
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tenA
|
Thiaminase II (EC 3.5.99.2)
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thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
|
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thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
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Position: -260
Score: 67.3 Sequence: GCACTCACCCGGGGG...
Locus tag: OB2597_18012
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: OB2597_18017
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: OB2597_18022
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiC
|
Thiamin biosynthesis protein ThiC
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |